Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC093716.1-201ENST00000435923 377 ntBASIC3.74□□□□□ -1.81
NPHP4O75161 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP4O75161 HIGD1AP2-201ENST00000446367 280 ntBASIC3.74□□□□□ -1.81
NPHP4O75161 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP4O75161 AC125238.1-201ENST00000448842 249 ntBASIC3.74□□□□□ -1.81
NPHP4O75161 AP000893.1-201ENST00000474462 794 ntBASIC3.74□□□□□ -1.81
NPHP4O75161 AC093663.2-201ENST00000484625 313 ntBASIC3.74□□□□□ -1.81
NPHP4O75161 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP4O75161 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.74□□□□□ -1.81
NPHP4O75161 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP4O75161 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPHP4O75161 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.74□□□□□ -1.81
NPHP4O75161 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
NPHP4O75161 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NPHP4O75161 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.74□□□□□ -1.81
NPHP4O75161 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPHP4O75161 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPHP4O75161 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.74□□□□□ -1.81
NPHP4O75161 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.73□□□□□ -1.81
NPHP4O75161 RNU1-35P-201ENST00000362782 153 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPHP4O75161 EI24P2-201ENST00000397776 1076 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.73□□□□□ -1.81
NPHP4O75161 OR2AS1P-201ENST00000427827 319 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 AC105402.2-201ENST00000438503 358 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 C1DP3-201ENST00000455013 423 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 TXNP6-201ENST00000510190 310 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 AC005921.1-201ENST00000510589 286 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.73□□□□□ -1.81
NPHP4O75161 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.73□□□□□ -1.81
NPHP4O75161 AC084033.1-201ENST00000550830 633 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.73□□□□□ -1.81
NPHP4O75161 MIR1273D-201ENST00000577266 86 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 AC092184.1-201ENST00000625042 715 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 AC004925.1-201ENST00000624256 2706 ntBASIC3.73□□□□□ -1.81
NPHP4O75161 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
NPHP4O75161 AC091564.4-201ENST00000533934 2194 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP4O75161 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP4O75161 Y_RNA.4-201ENST00000362333 112 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 AL079342.1-201ENST00000401460 267 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 AL583834.1-201ENST00000406943 343 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 HMGB3P23-201ENST00000414981 585 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP4O75161 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
NPHP4O75161 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.72□□□□□ -1.81
NPHP4O75161 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP4O75161 RNU6-319P-201ENST00000516025 108 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 AC068657.1-201ENST00000520807 306 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.72□□□□□ -1.81
NPHP4O75161 AC019131.2-201ENST00000609071 870 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 AL355493.4-201ENST00000618530 292 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.72□□□□□ -1.81
NPHP4O75161 AC026634.1-201ENST00000634369 198 ntBASIC3.72□□□□□ -1.81
NPHP4O75161 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.72□□□□□ -1.81
NPHP4O75161 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP4O75161 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
NPHP4O75161 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPHP4O75161 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.72□□□□□ -1.81
NPHP4O75161 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.71□□□□□ -1.81
NPHP4O75161 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPHP4O75161 RPL21P132-201ENST00000331267 462 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 RNU6-386P-201ENST00000362650 107 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 RNU6-76P-201ENST00000384060 104 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 MIR27B-201ENST00000385129 97 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 AL137014.1-201ENST00000420490 1226 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.71□□□□□ -1.82
NPHP4O75161 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.71□□□□□ -1.82
NPHP4O75161 CACYBPP1-201ENST00000438592 684 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.71□□□□□ -1.82
NPHP4O75161 UQCRHP3-201ENST00000451503 251 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.71□□□□□ -1.82
NPHP4O75161 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.71□□□□□ -1.82
NPHP4O75161 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.71□□□□□ -1.82
NPHP4O75161 IGKV2-36-201ENST00000519999 223 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.71□□□□□ -1.82
NPHP4O75161 NPM1P35-201ENST00000533043 868 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.71□□□□□ -1.82
NPHP4O75161 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.71□□□□□ -1.82
NPHP4O75161 AC010928.3-201ENST00000587712 541 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.71□□□□□ -1.82
NPHP4O75161 AC008277.2-201ENST00000605196 797 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NPHP4O75161 AL133370.2-201ENST00000619934 439 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 AC079228.1-201ENST00000624774 1049 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 MIR7153-201ENST00000637758 57 ntBASIC3.71□□□□□ -1.82
NPHP4O75161 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPHP4O75161 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPHP4O75161 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPHP4O75161 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.71□□□□□ -1.82
NPHP4O75161 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NPHP4O75161 AL133412.1-201ENST00000380194 2992 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP4O75161 SNORA46-201ENST00000384762 135 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 AL034374.1-201ENST00000406329 351 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 DPH3P2-201ENST00000422618 250 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP4O75161 RPL23AP31-201ENST00000456160 467 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
NPHP4O75161 RN7SKP24-201ENST00000515888 284 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms