Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC3O75056 MIR5047-201ENST00000579212 100 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.5□□□□□ -1.85
SDC3O75056 AC006077.1-201ENST00000604746 343 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AC005000.2-201ENST00000605468 310 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AC097504.2-201ENST00000608088 454 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AP000238.1-201ENST00000608759 426 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AP005137.2-201ENST00000609238 400 ntBASIC3.5□□□□□ -1.85
SDC3O75056 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.5□□□□□ -1.85
SDC3O75056 AL354976.1-201ENST00000613843 387 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AC022306.3-201ENST00000619930 550 ntBASIC3.5□□□□□ -1.85
SDC3O75056 AC091905.1-201ENST00000624400 311 ntBASIC3.5□□□□□ -1.85
SDC3O75056 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.5□□□□□ -1.85
SDC3O75056 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.5□□□□□ -1.85
SDC3O75056 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.5□□□□□ -1.85
SDC3O75056 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.5□□□□□ -1.85
SDC3O75056 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDC3O75056 AC007656.2-201ENST00000624902 4547 ntBASIC3.5□□□□□ -1.85
SDC3O75056 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDC3O75056 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.5□□□□□ -1.85
SDC3O75056 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.5□□□□□ -1.85
SDC3O75056 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDC3O75056 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SDC3O75056 AL645568.2-201ENST00000432815 1337 ntBASIC3.49□□□□□ -1.85
SDC3O75056 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SDC3O75056 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SDC3O75056 MIR620-201ENST00000385232 95 ntBASIC3.49□□□□□ -1.85
SDC3O75056 RNU6-837P-201ENST00000391056 108 ntBASIC3.49□□□□□ -1.85
SDC3O75056 AL121978.1-201ENST00000402778 359 ntBASIC3.49□□□□□ -1.85
SDC3O75056 AL139098.1-201ENST00000407291 389 ntBASIC3.49□□□□□ -1.85
SDC3O75056 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.49□□□□□ -1.85
SDC3O75056 RNA5SP120-201ENST00000410900 112 ntBASIC3.49□□□□□ -1.85
SDC3O75056 VN1R51P-201ENST00000411675 945 ntBASIC3.49□□□□□ -1.85
SDC3O75056 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.49□□□□□ -1.85
SDC3O75056 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.49□□□□□ -1.85
SDC3O75056 OR1AA1P-201ENST00000419597 916 ntBASIC3.49□□□□□ -1.85
SDC3O75056 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.49□□□□□ -1.85
SDC3O75056 RPF2P1-201ENST00000424137 906 ntBASIC3.49□□□□□ -1.85
SDC3O75056 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.49□□□□□ -1.85
SDC3O75056 AC005300.1-201ENST00000428401 373 ntBASIC3.49□□□□□ -1.85
SDC3O75056 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.49□□□□□ -1.85
SDC3O75056 AL591503.2-201ENST00000442314 1005 ntBASIC3.49□□□□□ -1.85
SDC3O75056 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SDC3O75056 AC115115.1-201ENST00000449927 248 ntBASIC3.49□□□□□ -1.85
SDC3O75056 MRPL42P4-201ENST00000453267 443 ntBASIC3.49□□□□□ -1.85
SDC3O75056 MTCO3P16-201ENST00000454456 754 ntBASIC3.49□□□□□ -1.85
SDC3O75056 MTATP6P14-201ENST00000455189 673 ntBASIC3.49□□□□□ -1.85
SDC3O75056 CEACAMP4-201ENST00000457676 421 ntBASIC3.49□□□□□ -1.85
SDC3O75056 AC104982.1-201ENST00000478775 574 ntBASIC3.49□□□□□ -1.85
SDC3O75056 MTCO3P44-201ENST00000510977 541 ntBASIC3.49□□□□□ -1.85
SDC3O75056 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.49□□□□□ -1.85
SDC3O75056 MTATP6P9-201ENST00000515039 680 ntBASIC3.49□□□□□ -1.85
SDC3O75056 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SDC3O75056 RNU2-27P-201ENST00000516185 142 ntBASIC3.49□□□□□ -1.85
SDC3O75056 RN7SKP244-201ENST00000516513 307 ntBASIC3.49□□□□□ -1.85
SDC3O75056 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.49□□□□□ -1.85
SDC3O75056 AC023632.1-201ENST00000518463 375 ntBASIC3.49□□□□□ -1.85
SDC3O75056 MTCO3P15-201ENST00000526563 574 ntBASIC3.49□□□□□ -1.85
SDC3O75056 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.49□□□□□ -1.85
SDC3O75056 AP003385.6-201ENST00000531603 374 ntBASIC3.49□□□□□ -1.85
SDC3O75056 YWHAZP1-201ENST00000556286 722 ntBASIC3.49□□□□□ -1.85
SDC3O75056 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.49□□□□□ -1.85
SDC3O75056 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.49□□□□□ -1.85
SDC3O75056 AC092953.2-201ENST00000608000 699 ntBASIC3.49□□□□□ -1.85
SDC3O75056 AC012531.5-201ENST00000611375 151 ntBASIC3.49□□□□□ -1.85
SDC3O75056 AC013437.2-201ENST00000639587 677 ntBASIC3.49□□□□□ -1.85
SDC3O75056 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.49□□□□□ -1.85
SDC3O75056 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SDC3O75056 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.49□□□□□ -1.85
SDC3O75056 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.49□□□□□ -1.85
SDC3O75056 AC117529.2-201ENST00000512159 2068 ntBASIC3.48□□□□□ -1.85
SDC3O75056 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.48□□□□□ -1.85
SDC3O75056 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SDC3O75056 RNU6-839P-201ENST00000363347 108 ntBASIC3.48□□□□□ -1.85
SDC3O75056 SNORD116-23-201ENST00000384645 92 ntBASIC3.48□□□□□ -1.85
SDC3O75056 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.48□□□□□ -1.85
SDC3O75056 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.48□□□□□ -1.85
SDC3O75056 BTF3P8-201ENST00000414577 526 ntBASIC3.48□□□□□ -1.85
SDC3O75056 TOMM22P1-201ENST00000418578 312 ntBASIC3.48□□□□□ -1.85
SDC3O75056 RPL21P66-201ENST00000426566 466 ntBASIC3.48□□□□□ -1.85
SDC3O75056 MTCYBP32-201ENST00000427945 1084 ntBASIC3.48□□□□□ -1.85
SDC3O75056 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.48□□□□□ -1.85
SDC3O75056 AC005326.1-201ENST00000429197 123 ntBASIC3.48□□□□□ -1.85
SDC3O75056 ELOCP13-201ENST00000443934 329 ntBASIC3.48□□□□□ -1.85
SDC3O75056 MTCYBP42-201ENST00000444653 1130 ntBASIC3.48□□□□□ -1.85
SDC3O75056 RBMY2UP-201ENST00000453474 324 ntBASIC3.48□□□□□ -1.85
SDC3O75056 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.48□□□□□ -1.85
SDC3O75056 AC099563.1-201ENST00000456086 418 ntBASIC3.48□□□□□ -1.85
SDC3O75056 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.48□□□□□ -1.85
SDC3O75056 RPL5P24-201ENST00000463742 885 ntBASIC3.48□□□□□ -1.85
SDC3O75056 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.48□□□□□ -1.85
SDC3O75056 AL049830.2-201ENST00000480072 201 ntBASIC3.48□□□□□ -1.85
SDC3O75056 TRAV31-201ENST00000502780 342 ntBASIC3.48□□□□□ -1.85
SDC3O75056 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.48□□□□□ -1.85
SDC3O75056 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.48□□□□□ -1.85
SDC3O75056 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.48□□□□□ -1.85
SDC3O75056 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms