Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL121972.1-201ENST00000402023 252 ntBASIC3.28□□□□□ -1.88
HCN1O60741 MTCO2P31-201ENST00000402702 684 ntBASIC3.28□□□□□ -1.88
HCN1O60741 RPS3AP25-201ENST00000411660 793 ntBASIC3.28□□□□□ -1.88
HCN1O60741 RPS7P13-201ENST00000413955 498 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC093578.1-201ENST00000415219 368 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC027644.1-201ENST00000419595 298 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AL513174.1-201ENST00000423182 629 ntBASIC3.28□□□□□ -1.88
HCN1O60741 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.28□□□□□ -1.88
HCN1O60741 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN1O60741 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.28□□□□□ -1.88
HCN1O60741 MTCYBP15-201ENST00000433123 1127 ntBASIC3.28□□□□□ -1.88
HCN1O60741 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN1O60741 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
HCN1O60741 ARF4P4-201ENST00000439608 520 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AL645931.1-201ENST00000439737 410 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AL592437.1-201ENST00000443781 492 ntBASIC3.28□□□□□ -1.88
HCN1O60741 ELOCP13-201ENST00000443934 329 ntBASIC3.28□□□□□ -1.88
HCN1O60741 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCN1O60741 Z99714.1-201ENST00000450463 807 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN1O60741 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
HCN1O60741 RPL7P49-201ENST00000471402 708 ntBASIC3.28□□□□□ -1.88
HCN1O60741 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
HCN1O60741 RPS27AP1-201ENST00000475545 471 ntBASIC3.28□□□□□ -1.88
HCN1O60741 RN7SL293P-201ENST00000481765 281 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC118282.2-201ENST00000508739 374 ntBASIC3.28□□□□□ -1.88
HCN1O60741 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCN1O60741 AP001207.1-201ENST00000524051 481 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AP003102.1-201ENST00000525638 661 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC103843.2-201ENST00000530523 682 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.28□□□□□ -1.88
HCN1O60741 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN1O60741 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.28□□□□□ -1.88
HCN1O60741 AL163153.1-201ENST00000554223 283 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.28□□□□□ -1.88
HCN1O60741 AC126365.2-201ENST00000580630 379 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC022069.1-201ENST00000582910 658 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.28□□□□□ -1.88
HCN1O60741 AC006116.7-201ENST00000590141 756 ntBASIC3.28□□□□□ -1.88
HCN1O60741 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HCN1O60741 BNIP3P38-201ENST00000601117 544 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC006077.1-201ENST00000604746 343 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC124016.2-201ENST00000610058 665 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC105227.2-201ENST00000615075 605 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AL138955.1-201ENST00000622881 1040 ntBASIC3.28□□□□□ -1.88
HCN1O60741 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.28□□□□□ -1.88
HCN1O60741 AC119674.1-207ENST00000641355 633 ntBASIC3.28□□□□□ -1.88
HCN1O60741 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HCN1O60741 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HCN1O60741 AL365440.1-201ENST00000436135 2167 ntBASIC3.28□□□□□ -1.88
HCN1O60741 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.28□□□□□ -1.88
HCN1O60741 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HCN1O60741 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HCN1O60741 MTND5P31-201ENST00000419366 1374 ntBASIC3.27□□□□□ -1.89
HCN1O60741 AC111188.2-201ENST00000529697 1387 ntBASIC3.27□□□□□ -1.89
HCN1O60741 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.27□□□□□ -1.89
HCN1O60741 SAGE4P-201ENST00000442271 3381 ntBASIC3.27□□□□□ -1.89
HCN1O60741 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.27□□□□□ -1.89
HCN1O60741 RNU6-1226P-201ENST00000384317 107 ntBASIC3.27□□□□□ -1.89
HCN1O60741 RNU6-441P-201ENST00000384545 106 ntBASIC3.27□□□□□ -1.89
HCN1O60741 MIR183-201ENST00000384958 110 ntBASIC3.27□□□□□ -1.89
HCN1O60741 U3.39-201ENST00000408569 239 ntBASIC3.27□□□□□ -1.89
HCN1O60741 RNA5SP293-201ENST00000410527 113 ntBASIC3.27□□□□□ -1.89
HCN1O60741 RPS3AP9-201ENST00000417027 792 ntBASIC3.27□□□□□ -1.89
HCN1O60741 AC073063.1-201ENST00000434352 607 ntBASIC3.27□□□□□ -1.89
HCN1O60741 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.27□□□□□ -1.89
HCN1O60741 PRDX3P3-201ENST00000447765 522 ntBASIC3.27□□□□□ -1.89
HCN1O60741 PRSS3P4-201ENST00000453323 162 ntBASIC3.27□□□□□ -1.89
HCN1O60741 RPS4XP2-201ENST00000458402 793 ntBASIC3.27□□□□□ -1.89
HCN1O60741 SYPL1P1-201ENST00000473622 768 ntBASIC3.27□□□□□ -1.89
HCN1O60741 MTCO3P35-201ENST00000485582 781 ntBASIC3.27□□□□□ -1.89
HCN1O60741 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.27□□□□□ -1.89
HCN1O60741 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.27□□□□□ -1.89
HCN1O60741 AC020893.1-201ENST00000502452 580 ntBASIC3.27□□□□□ -1.89
HCN1O60741 AC026414.1-201ENST00000504046 698 ntBASIC3.27□□□□□ -1.89
HCN1O60741 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.27□□□□□ -1.89
HCN1O60741 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.27□□□□□ -1.89
HCN1O60741 RN7SKP13-201ENST00000515933 244 ntBASIC3.27□□□□□ -1.89
HCN1O60741 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.27□□□□□ -1.89
HCN1O60741 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.27□□□□□ -1.89
HCN1O60741 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.27□□□□□ -1.89
HCN1O60741 AC006518.1-201ENST00000541449 943 ntBASIC3.27□□□□□ -1.89
HCN1O60741 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.27□□□□□ -1.89
HCN1O60741 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.27□□□□□ -1.89
HCN1O60741 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.27□□□□□ -1.89
HCN1O60741 RN7SL339P-201ENST00000580597 296 ntBASIC3.27□□□□□ -1.89
HCN1O60741 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
HCN1O60741 AC090330.1-201ENST00000588646 764 ntBASIC3.27□□□□□ -1.89
HCN1O60741 VN1R87P-201ENST00000596706 487 ntBASIC3.27□□□□□ -1.89
HCN1O60741 AC068620.4-201ENST00000636730 1182 ntBASIC3.27□□□□□ -1.89
HCN1O60741 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.27□□□□□ -1.89
HCN1O60741 AL513302.2-201ENST00000562313 1842 ntBASIC3.27□□□□□ -1.89
HCN1O60741 MTCO1P12-201ENST00000414273 1543 ntBASIC3.27□□□□□ -1.89
HCN1O60741 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HCN1O60741 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HCN1O60741 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.27□□□□□ -1.89
HCN1O60741 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HCN1O60741 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCN1O60741 ZNF37BP-203ENST00000452306 1352 ntBASIC3.26□□□□□ -1.89
HCN1O60741 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms