Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL139418.1-201ENST00000613613 177 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AC018816.2-201ENST00000621460 353 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX3O60493 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX3O60493 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX3O60493 OR5BR1P-201ENST00000524992 1330 ntBASIC3.61□□□□□ -1.83
SNX3O60493 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX3O60493 NUP58P1-201ENST00000502546 1738 ntBASIC3.61□□□□□ -1.83
SNX3O60493 AC073429.2-201ENST00000569694 1444 ntBASIC3.61□□□□□ -1.83
SNX3O60493 MTCO1P14-201ENST00000441695 1559 ntBASIC3.6□□□□□ -1.83
SNX3O60493 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SNX3O60493 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SNX3O60493 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SNX3O60493 AC079741.1-201ENST00000321498 212 ntBASIC3.6□□□□□ -1.83
SNX3O60493 RSL24D1P4-201ENST00000400938 484 ntBASIC3.6□□□□□ -1.83
SNX3O60493 RPS3AP23-201ENST00000401762 784 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX3O60493 AC108032.1-201ENST00000416706 207 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX3O60493 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX3O60493 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX3O60493 RPL23AP22-201ENST00000437556 453 ntBASIC3.6□□□□□ -1.83
SNX3O60493 HMGN2P21-201ENST00000447764 270 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX3O60493 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.6□□□□□ -1.83
SNX3O60493 AL645939.1-201ENST00000453429 797 ntBASIC3.6□□□□□ -1.83
SNX3O60493 ANP32BP2-201ENST00000454525 545 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AL139824.2-201ENST00000458731 1095 ntBASIC3.6□□□□□ -1.83
SNX3O60493 snoU13.3-201ENST00000459441 104 ntBASIC3.6□□□□□ -1.83
SNX3O60493 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX3O60493 PRELID3BP5-201ENST00000508612 460 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX3O60493 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX3O60493 OR4R3P-201ENST00000525084 838 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AP003385.6-201ENST00000531603 374 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX3O60493 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX3O60493 AC004024.1-201ENST00000549244 247 ntBASIC3.6□□□□□ -1.83
SNX3O60493 HSPE1P3-201ENST00000559254 309 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX3O60493 VN1R82P-201ENST00000601481 356 ntBASIC3.6□□□□□ -1.83
SNX3O60493 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX3O60493 AL161616.1-201ENST00000611867 286 ntBASIC3.6□□□□□ -1.83
SNX3O60493 MIR8059-201ENST00000620427 81 ntBASIC3.6□□□□□ -1.83
SNX3O60493 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX3O60493 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX3O60493 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX3O60493 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SNX3O60493 AC007656.2-201ENST00000624902 4547 ntBASIC3.6□□□□□ -1.83
SNX3O60493 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SNX3O60493 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX3O60493 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX3O60493 EXOC5P1-201ENST00000510543 1969 ntBASIC3.6□□□□□ -1.83
SNX3O60493 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.83
SNX3O60493 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNX3O60493 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNX3O60493 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNX3O60493 MIR383-201ENST00000362257 73 ntBASIC3.59□□□□□ -1.83
SNX3O60493 SOD2P1-201ENST00000396543 562 ntBASIC3.59□□□□□ -1.83
SNX3O60493 DHFRP6-201ENST00000401776 268 ntBASIC3.59□□□□□ -1.83
SNX3O60493 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.59□□□□□ -1.83
SNX3O60493 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX3O60493 AC068533.1-201ENST00000418542 415 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AC069213.2-201ENST00000420238 366 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AC092832.1-201ENST00000422934 400 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.59□□□□□ -1.83
SNX3O60493 BX890604.2-201ENST00000427883 474 ntBASIC3.59□□□□□ -1.83
SNX3O60493 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AP000907.1-201ENST00000428428 510 ntBASIC3.59□□□□□ -1.83
SNX3O60493 FTH1P6-201ENST00000430768 320 ntBASIC3.59□□□□□ -1.83
SNX3O60493 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX3O60493 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX3O60493 AC006466.1-201ENST00000438721 289 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AC125238.1-201ENST00000448842 249 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.59□□□□□ -1.83
SNX3O60493 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX3O60493 RPS20P24-201ENST00000457473 361 ntBASIC3.59□□□□□ -1.83
SNX3O60493 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SNX3O60493 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SNX3O60493 MTND2P14-201ENST00000482139 351 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AK3P4-201ENST00000504283 583 ntBASIC3.59□□□□□ -1.83
SNX3O60493 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
SNX3O60493 AC111000.3-201ENST00000508057 576 ntBASIC3.59□□□□□ -1.83
SNX3O60493 PHBP14-201ENST00000512887 367 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AC006499.2-201ENST00000513470 337 ntBASIC3.59□□□□□ -1.83
SNX3O60493 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.59□□□□□ -1.83
SNX3O60493 RN7SKP92-201ENST00000517266 244 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AP000926.4-201ENST00000527351 454 ntBASIC3.59□□□□□ -1.83
SNX3O60493 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SNX3O60493 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.59□□□□□ -1.83
SNX3O60493 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX3O60493 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX3O60493 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.59□□□□□ -1.83
SNX3O60493 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX3O60493 AC037471.2-201ENST00000564941 598 ntBASIC3.59□□□□□ -1.83
SNX3O60493 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX3O60493 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.59□□□□□ -1.83
SNX3O60493 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms