Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC025750.1-201ENST00000399891 379 ntBASIC3.68□□□□□ -1.82
PRKNO60260 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PRKNO60260 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 AC073264.1-201ENST00000411508 416 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRKNO60260 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.68□□□□□ -1.82
PRKNO60260 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.68□□□□□ -1.82
PRKNO60260 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 BMS1P19-201ENST00000433925 393 ntBASIC3.68□□□□□ -1.82
PRKNO60260 KCTD10P1-201ENST00000434203 625 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AC122718.1-201ENST00000439448 744 ntBASIC3.68□□□□□ -1.82
PRKNO60260 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.68□□□□□ -1.82
PRKNO60260 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRKNO60260 RANP8-201ENST00000444720 713 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.68□□□□□ -1.82
PRKNO60260 VN1R10P-201ENST00000447106 875 ntBASIC3.68□□□□□ -1.82
PRKNO60260 RPL36AP33-201ENST00000450395 310 ntBASIC3.68□□□□□ -1.82
PRKNO60260 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRKNO60260 TRGVB-201ENST00000453257 471 ntBASIC3.68□□□□□ -1.82
PRKNO60260 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 FAM133DP-201ENST00000464802 691 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.68□□□□□ -1.82
PRKNO60260 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 MTCYBP37-201ENST00000510642 1133 ntBASIC3.68□□□□□ -1.82
PRKNO60260 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRKNO60260 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.68□□□□□ -1.82
PRKNO60260 Y_RNA.695-201ENST00000516715 107 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 DEFB131D-201ENST00000526803 184 ntBASIC3.68□□□□□ -1.82
PRKNO60260 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.68□□□□□ -1.82
PRKNO60260 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.68□□□□□ -1.82
PRKNO60260 AC091516.1-201ENST00000549191 703 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AC024909.2-201ENST00000553035 286 ntBASIC3.68□□□□□ -1.82
PRKNO60260 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.68□□□□□ -1.82
PRKNO60260 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.68□□□□□ -1.82
PRKNO60260 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 U73023.1-201ENST00000603134 700 ntBASIC3.68□□□□□ -1.82
PRKNO60260 RN7SKP299-201ENST00000606679 301 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 HULC.1-201ENST00000612720 240 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AL161637.1-201ENST00000622380 412 ntBASIC3.68□□□□□ -1.82
PRKNO60260 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRKNO60260 SAGE2P-201ENST00000420011 2126 ntBASIC3.68□□□□□ -1.82
PRKNO60260 AL390237.1-201ENST00000404226 1415 ntBASIC3.68□□□□□ -1.82
PRKNO60260 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
PRKNO60260 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRKNO60260 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKNO60260 AC012020.1-201ENST00000624541 1728 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.67□□□□□ -1.82
PRKNO60260 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKNO60260 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 RNA5SP88-201ENST00000365560 109 ntBASIC3.67□□□□□ -1.82
PRKNO60260 RNU6-213P-201ENST00000384051 104 ntBASIC3.67□□□□□ -1.82
PRKNO60260 MIR649-201ENST00000384843 97 ntBASIC3.67□□□□□ -1.82
PRKNO60260 ZNF603P-201ENST00000405613 487 ntBASIC3.67□□□□□ -1.82
PRKNO60260 RPL23AP48-201ENST00000406913 488 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKNO60260 RPL23AP39-201ENST00000415533 405 ntBASIC3.67□□□□□ -1.82
PRKNO60260 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.67□□□□□ -1.82
PRKNO60260 ZNF885P-201ENST00000420174 1098 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AL953862.1-201ENST00000423016 168 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKNO60260 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKNO60260 FABP3P2-201ENST00000453169 399 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.67□□□□□ -1.82
PRKNO60260 MTCO3P2-201ENST00000457365 171 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.67□□□□□ -1.82
PRKNO60260 snoU13.7-201ENST00000459220 104 ntBASIC3.67□□□□□ -1.82
PRKNO60260 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKNO60260 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 AC026412.2-201ENST00000512270 1075 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AC091965.2-201ENST00000512324 613 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AC008802.1-201ENST00000519121 791 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AC060788.1-201ENST00000521318 469 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKNO60260 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKNO60260 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKNO60260 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.67□□□□□ -1.82
PRKNO60260 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKNO60260 CYCSP2-201ENST00000558168 301 ntBASIC3.67□□□□□ -1.82
PRKNO60260 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKNO60260 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKNO60260 AC005951.1-201ENST00000576706 485 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKNO60260 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 AL596327.1-201ENST00000603629 213 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AL031775.1-201ENST00000607014 887 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms