Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC110743.1-201ENST00000584870 478 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LDB2O43679 AC080078.2-201ENST00000603766 501 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AL591034.3-201ENST00000605511 685 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AC087752.4-201ENST00000605911 462 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 AC104073.3-201ENST00000610942 955 ntBASIC4.07□□□□□ -1.76
LDB2O43679 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AC243773.3-201ENST00000613270 256 ntBASIC4.07□□□□□ -1.76
LDB2O43679 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AC068792.1-201ENST00000621354 417 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AL590240.3-201ENST00000621416 943 ntBASIC4.07□□□□□ -1.76
LDB2O43679 AC231657.1-201ENST00000624313 397 ntBASIC4.07□□□□□ -1.76
LDB2O43679 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LDB2O43679 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
LDB2O43679 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LDB2O43679 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.07□□□□□ -1.76
LDB2O43679 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LDB2O43679 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LDB2O43679 AC016588.2-201ENST00000632484 3021 ntBASIC4.06□□□□□ -1.76
LDB2O43679 OR4G11P-202ENST00000642116 1414 ntBASIC4.06□□□□□ -1.76
LDB2O43679 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.06□□□□□ -1.76
LDB2O43679 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LDB2O43679 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LDB2O43679 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LDB2O43679 SNORA60-201ENST00000362396 134 ntBASIC4.06□□□□□ -1.76
LDB2O43679 RNU6-984P-201ENST00000363236 109 ntBASIC4.06□□□□□ -1.76
LDB2O43679 SNORD35B-201ENST00000363660 87 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AC007066.1-201ENST00000392902 381 ntBASIC4.06□□□□□ -1.76
LDB2O43679 SNORA3C-201ENST00000408792 125 ntBASIC4.06□□□□□ -1.76
LDB2O43679 RNA5SP306-201ENST00000411087 107 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AL663109.1-201ENST00000411498 844 ntBASIC4.06□□□□□ -1.76
LDB2O43679 HSPE1P12-201ENST00000412576 301 ntBASIC4.06□□□□□ -1.76
LDB2O43679 OR8G2P-201ENST00000412796 908 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.06□□□□□ -1.76
LDB2O43679 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.06□□□□□ -1.76
LDB2O43679 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.06□□□□□ -1.76
LDB2O43679 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.06□□□□□ -1.76
LDB2O43679 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.06□□□□□ -1.76
LDB2O43679 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.06□□□□□ -1.76
LDB2O43679 MTND1P34-201ENST00000438556 671 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AL512286.1-201ENST00000439244 400 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.06□□□□□ -1.76
LDB2O43679 RPS26P56-201ENST00000444468 240 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AC097493.1-201ENST00000463958 372 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.06□□□□□ -1.76
LDB2O43679 AC010301.1-201ENST00000473936 355 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AP000893.1-201ENST00000474462 794 ntBASIC4.06□□□□□ -1.76
LDB2O43679 RPL30P11-201ENST00000495304 339 ntBASIC4.06□□□□□ -1.76
LDB2O43679 RPL31P61-201ENST00000496160 376 ntBASIC4.06□□□□□ -1.76
LDB2O43679 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.06□□□□□ -1.76
LDB2O43679 MYL12AP1-201ENST00000518490 515 ntBASIC4.06□□□□□ -1.76
LDB2O43679 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LDB2O43679 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.06□□□□□ -1.76
LDB2O43679 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.06□□□□□ -1.76
LDB2O43679 AP002963.1-201ENST00000530590 184 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.06□□□□□ -1.76
LDB2O43679 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.06□□□□□ -1.76
LDB2O43679 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.06□□□□□ -1.76
LDB2O43679 OR6C7P-201ENST00000547875 934 ntBASIC4.06□□□□□ -1.76
LDB2O43679 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.06□□□□□ -1.76
LDB2O43679 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.06□□□□□ -1.76
LDB2O43679 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.06□□□□□ -1.76
LDB2O43679 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.06□□□□□ -1.76
LDB2O43679 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.06□□□□□ -1.76
LDB2O43679 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.06□□□□□ -1.76
LDB2O43679 AC025627.2-201ENST00000576220 160 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AP001004.1-201ENST00000582468 324 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AC078795.2-201ENST00000602835 1252 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AL451044.1-201ENST00000604867 238 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AC068276.1-201ENST00000605793 379 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AL158196.1-201ENST00000616786 434 ntBASIC4.06□□□□□ -1.76
LDB2O43679 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.06□□□□□ -1.76
LDB2O43679 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.06□□□□□ -1.76
LDB2O43679 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
LDB2O43679 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LDB2O43679 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LDB2O43679 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LDB2O43679 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LDB2O43679 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.05□□□□□ -1.76
LDB2O43679 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 Z73965.1-201ENST00000623412 2297 ntBASIC4.05□□□□□ -1.76
LDB2O43679 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.05□□□□□ -1.76
LDB2O43679 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.05□□□□□ -1.76
LDB2O43679 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.05□□□□□ -1.76
LDB2O43679 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.05□□□□□ -1.76
LDB2O43679 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
LDB2O43679 SPRR2C-201ENST00000290702 219 ntBASIC4.05□□□□□ -1.76
LDB2O43679 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LDB2O43679 RNU6-501P-201ENST00000364072 100 ntBASIC4.05□□□□□ -1.76
LDB2O43679 RNU1-85P-201ENST00000364127 164 ntBASIC4.05□□□□□ -1.76
LDB2O43679 RNU6-723P-201ENST00000383973 107 ntBASIC4.05□□□□□ -1.76
LDB2O43679 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LDB2O43679 ENSAP1-201ENST00000392855 326 ntBASIC4.05□□□□□ -1.76
LDB2O43679 SNRPEP2-201ENST00000397592 279 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms