Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC009501.3-201ENST00000605001 1352 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.38□□□□□ -1.87
CHMP2AO43633 AL365361.1-201ENST00000566942 3481 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.38□□□□□ -1.87
CHMP2AO43633 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CHMP2AO43633 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHMP2AO43633 OR5H2-201ENST00000355273 945 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHMP2AO43633 RNA5SP383-201ENST00000362934 120 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHMP2AO43633 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.38□□□□□ -1.87
CHMP2AO43633 DSTNP4-201ENST00000399472 474 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.38□□□□□ -1.87
CHMP2AO43633 AL513175.1-201ENST00000431492 780 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 AC004865.1-201ENST00000442276 1003 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 RSL24D1P2-201ENST00000445584 366 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 AC140076.1-201ENST00000449897 361 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 AC104308.1-201ENST00000454621 333 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 S100A11P2-201ENST00000467589 312 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.38□□□□□ -1.87
CHMP2AO43633 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.38□□□□□ -1.87
CHMP2AO43633 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.38□□□□□ -1.87
CHMP2AO43633 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.38□□□□□ -1.87
CHMP2AO43633 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.38□□□□□ -1.87
CHMP2AO43633 IGKV2D-36-201ENST00000518643 226 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.38□□□□□ -1.87
CHMP2AO43633 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.38□□□□□ -1.87
CHMP2AO43633 OR4G1P-201ENST00000588632 938 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 AC008687.2-201ENST00000597865 520 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 AC009948.4-201ENST00000604692 675 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 AC011816.2-201ENST00000607089 556 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 AC016911.1-201ENST00000613297 452 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.38□□□□□ -1.87
CHMP2AO43633 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
CHMP2AO43633 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHMP2AO43633 AP001350.1-201ENST00000601906 1524 ntBASIC3.38□□□□□ -1.87
CHMP2AO43633 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHMP2AO43633 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHMP2AO43633 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHMP2AO43633 RNU6-263P-201ENST00000363811 107 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 RNU1-140P-201ENST00000365040 165 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 SNORA44-201ENST00000384584 132 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHMP2AO43633 RPL5P18-201ENST00000406671 891 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 AL353692.2-201ENST00000407054 335 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP2AO43633 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP2AO43633 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 RPL37P4-201ENST00000448908 268 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 SSXP4-201ENST00000451349 245 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.37□□□□□ -1.87
CHMP2AO43633 AL136126.1-201ENST00000473603 402 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 PRELID3BP6-201ENST00000503839 571 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 DSTNP2-201ENST00000504533 515 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 AC010374.2-201ENST00000512933 535 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 AC010306.1-201ENST00000523223 1117 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 AP004371.1-201ENST00000525240 214 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.37□□□□□ -1.87
CHMP2AO43633 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.37□□□□□ -1.87
CHMP2AO43633 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHMP2AO43633 H3F3AP1-201ENST00000559984 334 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP2AO43633 IGHV3-29-201ENST00000604817 344 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP2AO43633 AC009032.1-201ENST00000617574 431 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHMP2AO43633 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP2AO43633 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP2AO43633 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.37□□□□□ -1.87
CHMP2AO43633 AL359893.1-201ENST00000447628 1580 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.37□□□□□ -1.87
CHMP2AO43633 MTND4P34-201ENST00000572715 1371 ntBASIC3.37□□□□□ -1.87
CHMP2AO43633 AC009487.2-201ENST00000420969 6821 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AL079305.1-201ENST00000623159 3008 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AC000403.1-201ENST00000613696 3585 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CHMP2AO43633 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
CHMP2AO43633 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP2AO43633 AL512646.1-201ENST00000269395 1077 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHMP2AO43633 U3.11-201ENST00000364476 212 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CHMP2AO43633 UBA52P6-201ENST00000399822 382 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 RNU2-71P-201ENST00000411395 189 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AC245054.2-201ENST00000415639 319 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 OR4K6P-201ENST00000416478 897 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP2AO43633 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.36□□□□□ -1.87
CHMP2AO43633 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP2AO43633 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP2AO43633 SYPL1P1-201ENST00000473622 768 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AC011825.1-201ENST00000484967 388 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP2AO43633 AF279873.1-201ENST00000523393 313 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AP001207.1-201ENST00000524051 481 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.36□□□□□ -1.87
CHMP2AO43633 AL845331.3-202ENST00000562856 261 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 EIF5A2P1-201ENST00000564027 460 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AC107954.1-201ENST00000565906 727 ntBASIC3.36□□□□□ -1.87
CHMP2AO43633 AC106782.4-201ENST00000568264 210 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms