Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC004217.3-201ENST00000551552 878 ntBASIC3.5□□□□□ -1.85
MSH4O15457 MTCYBP28-201ENST00000566728 1132 ntBASIC3.5□□□□□ -1.85
MSH4O15457 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.5□□□□□ -1.85
MSH4O15457 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH4O15457 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.5□□□□□ -1.85
MSH4O15457 AP002906.1-201ENST00000603405 233 ntBASIC3.5□□□□□ -1.85
MSH4O15457 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MSH4O15457 AC078880.5-201ENST00000617845 421 ntBASIC3.5□□□□□ -1.85
MSH4O15457 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.5□□□□□ -1.85
MSH4O15457 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
MSH4O15457 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
MSH4O15457 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
MSH4O15457 SNORD56.3-201ENST00000363507 71 ntBASIC3.49□□□□□ -1.85
MSH4O15457 SNORA48.2-201ENST00000390926 124 ntBASIC3.49□□□□□ -1.85
MSH4O15457 RNU6-932P-201ENST00000391108 106 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AC110754.1-201ENST00000399740 601 ntBASIC3.49□□□□□ -1.85
MSH4O15457 MTATP6P19-201ENST00000413797 659 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AC006960.1-201ENST00000419980 153 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.49□□□□□ -1.85
MSH4O15457 FO393414.1-201ENST00000428697 1184 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AC010881.1-201ENST00000433830 235 ntBASIC3.49□□□□□ -1.85
MSH4O15457 CYCSP32-201ENST00000440548 321 ntBASIC3.49□□□□□ -1.85
MSH4O15457 RPL23AP33-201ENST00000442301 452 ntBASIC3.49□□□□□ -1.85
MSH4O15457 RPS12P18-201ENST00000442381 270 ntBASIC3.49□□□□□ -1.85
MSH4O15457 OR51B8P-201ENST00000449892 769 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.49□□□□□ -1.85
MSH4O15457 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.49□□□□□ -1.85
MSH4O15457 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.49□□□□□ -1.85
MSH4O15457 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.49□□□□□ -1.85
MSH4O15457 CDC42P1-201ENST00000456658 548 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AC146507.1-201ENST00000468335 354 ntBASIC3.49□□□□□ -1.85
MSH4O15457 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.49□□□□□ -1.85
MSH4O15457 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MSH4O15457 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.49□□□□□ -1.85
MSH4O15457 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.49□□□□□ -1.85
MSH4O15457 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.49□□□□□ -1.85
MSH4O15457 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.49□□□□□ -1.85
MSH4O15457 HIGD1AP3-201ENST00000515857 278 ntBASIC3.49□□□□□ -1.85
MSH4O15457 SNORA64.4-201ENST00000516632 81 ntBASIC3.49□□□□□ -1.85
MSH4O15457 RNU6-467P-201ENST00000517027 110 ntBASIC3.49□□□□□ -1.85
MSH4O15457 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
MSH4O15457 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.49□□□□□ -1.85
MSH4O15457 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.49□□□□□ -1.85
MSH4O15457 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.49□□□□□ -1.85
MSH4O15457 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.49□□□□□ -1.85
MSH4O15457 MIR4325-201ENST00000583049 90 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.49□□□□□ -1.85
MSH4O15457 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.49□□□□□ -1.85
MSH4O15457 MTATP6P2-201ENST00000603319 678 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AC120053.1-201ENST00000607706 736 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AC112503.1-201ENST00000608436 391 ntBASIC3.49□□□□□ -1.85
MSH4O15457 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.49□□□□□ -1.85
MSH4O15457 AL713922.2-201ENST00000619384 716 ntBASIC3.49□□□□□ -1.85
MSH4O15457 AC022079.2-201ENST00000619739 566 ntBASIC3.49□□□□□ -1.85
MSH4O15457 MTND5P28-201ENST00000438005 1594 ntBASIC3.49□□□□□ -1.85
MSH4O15457 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
MSH4O15457 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MSH4O15457 AC066616.2-201ENST00000559334 1481 ntBASIC3.48□□□□□ -1.85
MSH4O15457 OR5BR1P-201ENST00000524992 1330 ntBASIC3.48□□□□□ -1.85
MSH4O15457 SAGE4P-201ENST00000442271 3381 ntBASIC3.48□□□□□ -1.85
MSH4O15457 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.48□□□□□ -1.85
MSH4O15457 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MSH4O15457 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.48□□□□□ -1.85
MSH4O15457 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.48□□□□□ -1.85
MSH4O15457 U6.112-201ENST00000384129 70 ntBASIC3.48□□□□□ -1.85
MSH4O15457 SNORA40.4-201ENST00000390971 128 ntBASIC3.48□□□□□ -1.85
MSH4O15457 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.48□□□□□ -1.85
MSH4O15457 AC073264.1-201ENST00000411508 416 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AL024507.1-201ENST00000412741 274 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AC009237.5-201ENST00000414271 501 ntBASIC3.48□□□□□ -1.85
MSH4O15457 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.48□□□□□ -1.85
MSH4O15457 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.48□□□□□ -1.85
MSH4O15457 GTF2IP23-201ENST00000423746 351 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AC011242.1-201ENST00000433596 1158 ntBASIC3.48□□□□□ -1.85
MSH4O15457 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.48□□□□□ -1.85
MSH4O15457 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.48□□□□□ -1.85
MSH4O15457 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.48□□□□□ -1.85
MSH4O15457 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AP000873.1-201ENST00000463987 400 ntBASIC3.48□□□□□ -1.85
MSH4O15457 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.48□□□□□ -1.85
MSH4O15457 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.48□□□□□ -1.85
MSH4O15457 AC087879.1-201ENST00000474343 374 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AP000893.1-201ENST00000474462 794 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.48□□□□□ -1.85
MSH4O15457 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.48□□□□□ -1.85
MSH4O15457 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.48□□□□□ -1.85
MSH4O15457 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.48□□□□□ -1.85
MSH4O15457 RNA5SP217-201ENST00000515959 91 ntBASIC3.48□□□□□ -1.85
MSH4O15457 RNA5SP341-201ENST00000516261 117 ntBASIC3.48□□□□□ -1.85
MSH4O15457 RNU4-60P-201ENST00000517239 135 ntBASIC3.48□□□□□ -1.85
MSH4O15457 PSMA2P1-201ENST00000526365 646 ntBASIC3.48□□□□□ -1.85
MSH4O15457 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.48□□□□□ -1.85
MSH4O15457 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.48□□□□□ -1.85
MSH4O15457 AL121603.1-201ENST00000553815 142 ntBASIC3.48□□□□□ -1.85
MSH4O15457 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.48□□□□□ -1.85
MSH4O15457 NIFKP8-201ENST00000560500 874 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AC006539.2-201ENST00000601729 572 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AC133794.1-201ENST00000602731 914 ntBASIC3.48□□□□□ -1.85
MSH4O15457 AL591516.1-201ENST00000611326 274 ntBASIC3.48□□□□□ -1.85
MSH4O15457 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms