Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC006517.1-201ENST00000480485 328 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 NCOR1P1-202ENST00000486162 291 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 GTF2IP9-201ENST00000502460 301 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.78□□□□□ -1.64
NPHP1O15259 AC025445.1-201ENST00000502728 300 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 AC108941.1-201ENST00000502853 530 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.78□□□□□ -1.64
NPHP1O15259 AC005921.1-201ENST00000510589 286 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 AC023141.12-201ENST00000512399 199 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 AC008837.2-201ENST00000513076 418 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.78□□□□□ -1.64
NPHP1O15259 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.78□□□□□ -1.64
NPHP1O15259 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.78□□□□□ -1.64
NPHP1O15259 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.78□□□□□ -1.64
NPHP1O15259 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.78□□□□□ -1.64
NPHP1O15259 MTCO2P2-201ENST00000591258 225 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 AC010591.1-201ENST00000603941 649 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 DPRXP5-201ENST00000604662 539 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 AL442067.2-201ENST00000614033 363 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.78□□□□□ -1.64
NPHP1O15259 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.78□□□□□ -1.64
NPHP1O15259 AC022509.4-201ENST00000621404 572 ntBASIC4.78□□□□□ -1.64
NPHP1O15259 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.78□□□□□ -1.64
NPHP1O15259 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NPHP1O15259 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPHP1O15259 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NPHP1O15259 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.77□□□□□ -1.65
NPHP1O15259 MTCO1P23-201ENST00000415223 1526 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPHP1O15259 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.77□□□□□ -1.65
NPHP1O15259 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPHP1O15259 AC007685.1-201ENST00000329806 452 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 RNA5SP50-201ENST00000363731 107 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 ERHP2-201ENST00000402323 299 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 RPL7P53-201ENST00000421245 739 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 AL513175.2-201ENST00000422071 443 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.77□□□□□ -1.65
NPHP1O15259 USP9YP24-201ENST00000434374 697 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 AL138799.3-201ENST00000438968 350 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 USP9YP17-201ENST00000444617 696 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.77□□□□□ -1.65
NPHP1O15259 TRAV31-201ENST00000502780 342 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.77□□□□□ -1.65
NPHP1O15259 RNA5SP309-201ENST00000516670 106 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 MTCYBP41-201ENST00000528913 1123 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.77□□□□□ -1.65
NPHP1O15259 AC005832.3-201ENST00000537929 631 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 AC107016.1-201ENST00000550463 337 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 HIGD1AP17-201ENST00000554576 276 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 AL132857.1-201ENST00000555180 708 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.77□□□□□ -1.65
NPHP1O15259 uc_338.32-201ENST00000615087 172 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 AC243312.2-201ENST00000623340 601 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 CYP3A51P-201ENST00000633513 256 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 MTND2P41-201ENST00000637599 773 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPHP1O15259 MFSD8-236ENST00000641509 4050 ntBASIC4.77□□□□□ -1.65
NPHP1O15259 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPHP1O15259 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NPHP1O15259 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.76□□□□□ -1.65
NPHP1O15259 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.76□□□□□ -1.65
NPHP1O15259 CDR1-202ENST00000625883 1485 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
NPHP1O15259 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPHP1O15259 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.76□□□□□ -1.65
NPHP1O15259 SNRPEP3-201ENST00000338402 276 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPHP1O15259 RNU4-68P-201ENST00000364314 141 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 RNU6-629P-201ENST00000384061 103 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 RNU6-821P-201ENST00000390995 107 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 U3.29-201ENST00000391296 212 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPHP1O15259 RPL31P1-201ENST00000398116 372 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPHP1O15259 RNA5SP306-201ENST00000411087 107 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.76□□□□□ -1.65
NPHP1O15259 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.76□□□□□ -1.65
NPHP1O15259 TOMM22P1-201ENST00000418578 312 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 AP000907.1-201ENST00000428428 510 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 AL159987.2-201ENST00000432754 307 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.76□□□□□ -1.65
NPHP1O15259 MTCYBP11-201ENST00000447254 1109 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.76□□□□□ -1.65
NPHP1O15259 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.76□□□□□ -1.65
NPHP1O15259 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPHP1O15259 AC005410.1-202ENST00000460347 485 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.76□□□□□ -1.65
NPHP1O15259 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.76□□□□□ -1.65
NPHP1O15259 AP001636.2-201ENST00000525517 696 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.76□□□□□ -1.65
NPHP1O15259 GNRHR2P1-201ENST00000555315 631 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 AC023813.2-201ENST00000564321 469 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 AL132657.2-201ENST00000564417 358 ntBASIC4.76□□□□□ -1.65
NPHP1O15259 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
NPHP1O15259 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.76□□□□□ -1.65
NPHP1O15259 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.76□□□□□ -1.65
NPHP1O15259 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.76□□□□□ -1.65
NPHP1O15259 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms