Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 RNU6-97P-201ENST00000363387 104 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 Y_RNA.248-201ENST00000364501 109 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 U3.20-201ENST00000390909 217 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 MTND1P23-201ENST00000416931 372 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 PSMA2P3-201ENST00000429685 675 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC073465.2-201ENST00000440938 498 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 RBM43P1-201ENST00000476891 1081 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC098976.1-201ENST00000513014 541 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 IGKV2D-36-201ENST00000518643 226 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AP003181.2-201ENST00000528941 181 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC106782.4-201ENST00000568264 210 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 RN7SL652P-201ENST00000577769 300 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC018695.5-201ENST00000605872 315 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AL157786.1-207ENST00000627771 695 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC140479.6-201ENST00000633535 357 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AC012442.3-202ENST00000636742 206 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 AL049555.1-201ENST00000562834 1933 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 Y_RNA.296-201ENST00000364930 108 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC019155.1-201ENST00000382242 574 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 SNORA2.3-201ENST00000383920 135 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 RPL23AP32-201ENST00000395315 459 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 RPS3AP36-201ENST00000398190 775 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 MIR1250-201ENST00000408098 113 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 RNA5SP56-201ENST00000410277 118 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 TBCAP2-201ENST00000416175 326 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 RPS4XP10-201ENST00000465034 731 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC023598.1-201ENST00000472521 361 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 MYL12BP2-201ENST00000503948 512 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 RNA5SP392-201ENST00000516905 112 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 SCARNA20.4-201ENST00000516969 131 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC105233.3-201ENST00000531125 744 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 OR8L1P-201ENST00000534005 955 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC123904.2-201ENST00000548059 300 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 CENPUP2-201ENST00000555897 1186 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC115621.1-201ENST00000604653 858 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AL008729.2-201ENST00000606393 473 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AL355472.4-201ENST00000610233 626 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC019176.2-201ENST00000611579 315 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AL158209.2-201ENST00000619266 216 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC012150.2-201ENST00000621300 544 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AL359880.1-201ENST00000621879 266 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 AC091925.2-201ENST00000625059 256 ntBASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85CA6NKD9 MAPK10-349ENST00000641767 3661 ntBASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85CA6NKD9 AC011460.1-201ENST00000636268 1834 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms