Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV5S1A1TA0A578 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV5S1A1TA0A578 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
TCRBV5S1A1TA0A578 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TCRBV5S1A1TA0A578 AC006971.1-201ENST00000407916 4486 ntBASIC4.32□□□□□ -1.72
TCRBV5S1A1TA0A578 XPOTP1-201ENST00000443317 2398 ntBASIC4.32□□□□□ -1.72
TCRBV5S1A1TA0A578 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV5S1A1TA0A578 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
TCRBV5S1A1TA0A578 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TCRBV5S1A1TA0A578 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC093775.1-201ENST00000624154 1868 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 MIR383-201ENST00000362257 73 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 HMGB1P17-201ENST00000403495 628 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC011742.1-201ENST00000431448 434 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AL596276.1-201ENST00000434465 418 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AL356276.2-201ENST00000435919 558 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 UBE2V1P8-201ENST00000437166 265 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 RPL23AP46-201ENST00000438548 490 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AL353748.1-201ENST00000440753 474 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 RBMX2P4-201ENST00000441256 376 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AL022238.1-201ENST00000442557 355 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 MTCO1P27-201ENST00000448269 226 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC010469.1-201ENST00000463864 576 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 MTND6P6-201ENST00000478031 263 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC012123.2-201ENST00000485809 248 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 RPS23P1-201ENST00000491662 432 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC105252.1-201ENST00000503089 286 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC093840.1-201ENST00000511599 336 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 NRON-201ENST00000517270 370 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 IGKV2-38-201ENST00000517443 247 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 MTND4LP18-201ENST00000526864 291 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 RPL23AP87-202ENST00000573039 466 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC137800.2-201ENST00000574375 120 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 MIR5697-201ENST00000578045 78 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AL139395.1-201ENST00000603662 160 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC067959.1-201ENST00000604334 379 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AP001596.2-201ENST00000608410 312 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC131902.3-201ENST00000611767 581 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC078899.5-201ENST00000612475 178 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC090517.2-201ENST00000614966 680 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 OR5H6-203ENST00000642105 978 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 AC093849.1-201ENST00000563631 2209 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 MTCO1P7-201ENST00000419523 1542 ntBASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV5S1A1TA0A578 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 RN7SKP226-201ENST00000364912 300 ntBASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 RNU6-441P-201ENST00000384545 106 ntBASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 DSTNP4-201ENST00000399472 474 ntBASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 BTF3P7-201ENST00000407097 488 ntBASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 MIR1305-201ENST00000408300 86 ntBASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 AL133384.1-201ENST00000412744 351 ntBASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 AL807761.1-201ENST00000417622 171 ntBASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 OR8F1P-201ENST00000425243 930 ntBASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 COX6CP15-201ENST00000426313 211 ntBASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.3□□□□□ -1.72
TCRBV5S1A1TA0A578 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms