Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MTND2P26-201ENST00000528255 1029 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC124293.1-201ENST00000530034 493 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 RFPL1S-203ENST00000539579 330 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 CYB5AP5-201ENST00000549779 389 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 CBX3P5-201ENST00000552017 521 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 ZNF971P-201ENST00000562068 1249 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC006116.7-201ENST00000590141 756 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC009948.4-201ENST00000604692 675 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 RNA5SP108-201ENST00000605921 117 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC010872.1-201ENST00000624225 675 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC073476.4-201ENST00000628409 72 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC107081.3-201ENST00000612715 2034 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 SNORA54-201ENST00000384281 123 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 MIR184-201ENST00000384962 84 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 MIR525-201ENST00000384978 85 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 RN7SKP220-201ENST00000410611 288 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 RNA5SP31-201ENST00000411144 127 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 NUP35P2-201ENST00000416748 943 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 GLRXP1-201ENST00000423261 334 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 HSFY1P1-201ENST00000423928 1178 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 RPL36P19-201ENST00000430744 301 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC234064.1-201ENST00000436312 247 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 USP9YP7-201ENST00000436723 430 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 ARF4P4-201ENST00000439608 520 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC016696.1-201ENST00000446949 318 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 USP9YP32-201ENST00000452432 430 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 HMGB3P30-201ENST00000457863 606 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC011825.1-201ENST00000484967 388 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC026414.1-201ENST00000504046 698 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC016065.2-201ENST00000514530 444 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 IGLVIV-53-201ENST00000520107 367 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC010735.1-201ENST00000567305 1026 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AP004247.3-201ENST00000608682 624 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AL359535.1-201ENST00000612100 1087 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC126544.2-201ENST00000625174 749 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 DCAF13P1-201ENST00000495256 1330 ntBASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.36□□□□□ -1.87
SMIM28A0A1B0GU29 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 RNA5SP167-201ENST00000365461 116 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 OR1L1-202ENST00000373686 1083 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 SNORA51.12-201ENST00000384448 134 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 MIR153-1-201ENST00000384914 90 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 UBA52P6-201ENST00000399822 382 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AC096533.1-201ENST00000411645 353 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 ISCA1P2-201ENST00000438679 421 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AP000873.1-201ENST00000463987 400 ntBASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
SMIM28A0A1B0GU29 GMPSP1-201ENST00000514075 579 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms