Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC010653.1-201ENST00000571108 881 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 MIR5186-201ENST00000577504 120 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 MIR4474-201ENST00000579189 78 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC018618.2-201ENST00000604770 446 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC100793.4-201ENST00000613683 429 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC009464.1-201ENST00000615731 469 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC231759.1-201ENST00000616455 597 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 Z99129.2-201ENST00000619967 314 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 MIR23A-201ENST00000385245 73 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AC091286.1-201ENST00000431233 461 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 HSPD1P21-201ENST00000436541 245 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 HMGN2P20-201ENST00000437531 273 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AL590639.1-201ENST00000456484 337 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AC073522.1-201ENST00000483312 377 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 HMGN1P15-201ENST00000513870 295 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AC104986.1-201ENST00000517978 436 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 SERPINE4P-201ENST00000554978 281 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AL020991.1-201ENST00000612314 373 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AL590240.3-201ENST00000621416 943 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 U6.107-201ENST00000637108 79 ntBASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
USH1CQ9Y6N9 AC007342.9-201ENST00000623877 1385 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 ASNSP3-201ENST00000451989 1306 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC103988.1-201ENST00000566382 2177 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC016716.1-201ENST00000265882 708 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 SNORA63.1-201ENST00000362493 131 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 RPS29P4-201ENST00000414733 161 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 SSXP9-201ENST00000417503 292 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 TOMM22P1-201ENST00000418578 312 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 AL355994.1-201ENST00000424379 260 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 SAR1AP4-201ENST00000429225 591 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 Z99714.1-201ENST00000450463 807 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 RPS15AP1-201ENST00000457423 391 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 RPL21P8-201ENST00000465083 535 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 RPL7P49-201ENST00000471402 708 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 RNU6-1073P-201ENST00000517182 106 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 AF279873.1-201ENST00000523393 313 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 C1DP5-201ENST00000525775 383 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC011374.2-201ENST00000607135 526 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC069200.1-201ENST00000609511 323 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 AC012314.7-201ENST00000619693 93 ntBASIC3□□□□□ -1.93
USH1CQ9Y6N9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3□□□□□ -1.93
USH1CQ9Y6N9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3□□□□□ -1.93
USH1CQ9Y6N9 SNORA70.4-201ENST00000365509 134 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 RNU6-40P-201ENST00000384254 107 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 SAR1AP2-201ENST00000392696 594 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AL357075.1-201ENST00000404107 726 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 MTCYBP24-201ENST00000420387 1106 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 HMGN2P31-201ENST00000432430 273 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 HIGD1AP11-201ENST00000438361 280 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AC092685.1-201ENST00000447960 1243 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 RPL23AP15-201ENST00000450202 459 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms