Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 RN7SL254P-201ENST00000460609 284 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 MED28P2-201ENST00000475771 317 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 RPL21P103-201ENST00000479921 488 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 RPL17P19-201ENST00000489069 552 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AC097486.1-201ENST00000515331 210 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 RN7SKP35-201ENST00000517210 151 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AC002310.3-201ENST00000569728 723 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AC007998.5-201ENST00000622938 237 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AC022400.9-201ENST00000623633 273 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AP001784.1-201ENST00000624107 428 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 MIR4272-201ENST00000635924 64 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AP000550.3-201ENST00000637734 379 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AP002512.4-202ENST00000641599 4530 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AC024651.2-201ENST00000562480 2098 ntBASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HRH3Q9Y5N1 AL731556.1-201ENST00000394628 3711 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 DOCK11P1-201ENST00000553480 5932 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 RNU6-1059P-201ENST00000363752 98 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AP000580.1-201ENST00000404439 358 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 RPS4XP7-201ENST00000406274 780 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 RNU4-65P-201ENST00000410473 140 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AL137014.1-201ENST00000420490 1226 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 RPL7P2-201ENST00000427639 268 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 RPL21P91-201ENST00000429231 479 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AL392103.1-201ENST00000447000 198 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AL590664.1-201ENST00000448065 339 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC243772.1-201ENST00000451620 410 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC234775.1-201ENST00000454247 670 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 RN7SL714P-201ENST00000487050 298 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC004453.1-201ENST00000487895 408 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC022447.4-201ENST00000504053 364 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC105758.1-201ENST00000506038 399 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC025465.3-201ENST00000510570 311 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 IGKV1D-22-201ENST00000518953 324 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC109446.1-201ENST00000566172 220 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 MIR4701-201ENST00000583094 63 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 HMGB2P1-201ENST00000591146 634 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 NANOGP3-201ENST00000605855 286 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 PABPC1P7-201ENST00000413177 1513 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 BIN2P1-201ENST00000504996 1530 ntBASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.77□□□□□ -1.49
HRH3Q9Y5N1 GUCY1B2-204ENST00000531898 1979 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms