Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RPL23AP58-201ENST00000440453 469 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 RPL6P5-201ENST00000445678 828 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 Z96811.1-201ENST00000445880 108 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 RPL23AP31-201ENST00000456160 467 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC073901.1-201ENST00000462471 408 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 RN7SL807P-201ENST00000470923 297 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC017015.1-201ENST00000477387 286 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC126182.1-201ENST00000478134 357 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AL358832.1-201ENST00000497800 389 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 SEM1P1-201ENST00000506694 209 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 RN7SKP57-201ENST00000517248 293 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC090136.1-201ENST00000520009 240 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 MTND2P17-201ENST00000550281 688 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AL121594.4-201ENST00000556211 1196 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 MIR4635-201ENST00000583759 79 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AC105429.2-201ENST00000610567 517 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 AL136520.1-201ENST00000600311 1322 ntBASIC1.87□□□□□ -2.11
UBE2D4Q9Y2X8 SAGE4P-201ENST00000442271 3381 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 RNA5SP393-201ENST00000363423 117 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 RNU4-7P-201ENST00000364758 141 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 MIR153-1-201ENST00000384914 90 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 CCNB2P1-201ENST00000399411 1150 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC112220.1-201ENST00000434628 355 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 HMGB1P45-201ENST00000435986 653 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 CR769767.1-201ENST00000436337 346 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 KC877373.1-201ENST00000479066 408 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC026427.2-201ENST00000506228 536 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC111000.2-201ENST00000507775 550 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 HIGD1AP18-201ENST00000520730 278 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC123904.3-201ENST00000547218 814 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 MIR4444-1-201ENST00000581696 74 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 FAM106CP-201ENST00000582212 507 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 MIR4444-2-201ENST00000584390 74 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC104237.2-201ENST00000612456 443 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 ZNF807-201ENST00000328088 1707 ntBASIC1.86□□□□□ -2.11
UBE2D4Q9Y2X8 AL512283.1-201ENST00000606756 1384 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 MIR6073-201ENST00000352083 89 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 Y_RNA.333-201ENST00000365274 102 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 RNVU1-14-201ENST00000384770 164 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 RNA5SP210-201ENST00000391034 120 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 RPS6P14-201ENST00000425165 719 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 UBE2V1P1-201ENST00000430836 445 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC006994.1-201ENST00000438212 839 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 HMGB1P5-202ENST00000451497 985 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 RN7SKP244-201ENST00000516513 307 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 RNU6-943P-201ENST00000516960 98 ntBASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D4Q9Y2X8 AC100870.1-201ENST00000522035 505 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms