Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC011825.1-201ENST00000484967 388 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AC041039.1-201ENST00000485656 536 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 OR4G11P-201ENST00000492842 939 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AC108022.1-201ENST00000493466 478 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 KRT19P6-201ENST00000510983 209 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AC026402.1-201ENST00000513642 170 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 RNU6-405P-201ENST00000516637 110 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AC090502.2-201ENST00000549267 280 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 CYCSP2-201ENST00000558168 301 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AL121834.1-201ENST00000572284 509 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AL109618.2-201ENST00000605527 211 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 Z99129.1-201ENST00000612510 255 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 MIR6891-201ENST00000618788 93 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 RMST_9.1-201ENST00000619945 193 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AL356596.1-201ENST00000624230 379 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AC034229.5-201ENST00000624258 185 ntBASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.69□□□□□ -1.66
SSX2IPQ9Y2D8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AL158163.1-201ENST00000603915 1649 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC139769.1-204ENST00000472297 1931 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AL118496.1-201ENST00000440201 1812 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 RNU6-433P-201ENST00000363216 104 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 RNU6-1042P-201ENST00000384204 107 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 RNU6-517P-201ENST00000384362 110 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 RNU6-628P-201ENST00000410675 107 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 UBE2V1P10-201ENST00000414685 269 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 RAC1P3-201ENST00000416129 580 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC092427.1-201ENST00000439177 601 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 MTCO1P48-201ENST00000448024 1096 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 RNA5SP154-201ENST00000516193 111 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 OR8R1P-201ENST00000543943 764 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 MIR1254-2-201ENST00000579553 63 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC083760.1-201ENST00000589621 670 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC012065.4-201ENST00000602445 679 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC025946.2-201ENST00000603398 234 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AL591034.3-201ENST00000605511 685 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC092794.1-201ENST00000612734 582 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC243773.3-201ENST00000613270 256 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC004825.2-201ENST00000616634 455 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC093536.2-201ENST00000565257 1406 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 AC011266.1-201ENST00000624119 3569 ntBASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
SSX2IPQ9Y2D8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms