Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AL645937.1-202ENST00000421799 937 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 CRIP1P1-201ENST00000427567 185 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 OR4F13P-201ENST00000428478 931 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 FTH1P1-201ENST00000437933 532 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC127537.2-201ENST00000439258 465 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 HMGB3P9-201ENST00000441799 583 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AL389915.2-201ENST00000454576 441 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC020893.1-201ENST00000502452 580 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 BNIP3P6-201ENST00000549284 499 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 PSMA3P-201ENST00000555485 635 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 OR1F2P-201ENST00000570470 933 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC006116.3-201ENST00000592968 361 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC243960.4-201ENST00000600532 288 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC007687.1-201ENST00000602704 304 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC020910.2-201ENST00000603635 610 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC113139.1-201ENST00000605049 239 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 C2orf27A-204ENST00000623058 969 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC015908.5-201ENST00000623289 343 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 MIR1302-1-201ENST00000637932 143 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 AC004972.1-201ENST00000623934 2209 ntBASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
CDC42EP3Q9UKI2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC009951.1-201ENST00000623674 2614 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 Y_RNA.162-201ENST00000363683 102 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 Y_RNA.474-201ENST00000384341 102 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 RNU6-39P-201ENST00000384344 107 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 MIR558-201ENST00000384920 94 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 MIR141-201ENST00000384975 95 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 MIR514A2-201ENST00000385131 88 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 MIR514A3-201ENST00000385132 88 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 RNA5SP296-201ENST00000410523 111 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 RNU2-62P-201ENST00000410868 191 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 RNU6-193P-201ENST00000410977 107 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 RN7SKP140-201ENST00000411196 284 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 FAR2P2-201ENST00000413041 594 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 BTF3L4P3-201ENST00000418879 476 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC093162.1-201ENST00000419682 124 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 FAR2P4-202ENST00000425399 584 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 RPL34P6-201ENST00000432390 345 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 NDUFA5P4-201ENST00000436704 385 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC009220.1-201ENST00000451614 275 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AL513533.1-201ENST00000453728 415 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 RPL12P39-201ENST00000455456 496 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 HMGB1P21-201ENST00000502313 581 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 Y_RNA.691-201ENST00000516611 103 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 MIR2117-201ENST00000516780 80 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 RNU6-1314P-201ENST00000517139 104 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 MIR4697-201ENST00000582977 78 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms