Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AL355379.1-201ENST00000405542 640 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 Z99755.1-201ENST00000414048 380 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 OR51AB1P-201ENST00000429046 620 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AC006994.1-201ENST00000438212 839 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AC004865.1-201ENST00000442276 1003 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 TMEM248P1-201ENST00000510579 951 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 FABP5P12-201ENST00000515543 389 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 RNU6-415P-201ENST00000516252 97 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 SNORA70.19-201ENST00000516717 90 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AC037471.2-201ENST00000564941 598 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 MTND4LP25-201ENST00000570218 163 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AC090616.5-202ENST00000582111 297 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 Z83843.1-201ENST00000604070 3685 ntBASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLIP2Q9UDT6 RNA5SP295-201ENST00000362655 121 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 MIR525-201ENST00000384978 85 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 SKINT1L-201ENST00000401057 817 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AP000567.1-201ENST00000406413 156 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AL513175.1-201ENST00000431492 780 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC091862.1-201ENST00000438016 1100 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 RPS26P30-201ENST00000443431 335 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 HSFY3P-201ENST00000444242 1191 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AL590399.6-201ENST00000446396 307 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AL096803.2-201ENST00000450032 677 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 RN7SKP57-201ENST00000517248 293 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 IGHV3-76-201ENST00000522465 295 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC113192.3-201ENST00000529152 742 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC124293.1-201ENST00000530034 493 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC093510.2-201ENST00000562820 896 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AL845331.3-202ENST00000562856 261 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC004223.2-201ENST00000590309 544 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC011468.4-201ENST00000603942 409 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC021851.1-201ENST00000608537 1082 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC099778.2-201ENST00000610904 211 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC048344.4-201ENST00000619744 527 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC018816.2-201ENST00000621460 353 ntBASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLIP2Q9UDT6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AC025263.3-201ENST00000622965 1396 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AC073055.1-201ENST00000456901 1621 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 SNORA38.1-201ENST00000364172 131 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 RNU6-1151P-201ENST00000384684 107 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 MIR23A-201ENST00000385245 73 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 RNU6-77P-201ENST00000410554 91 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 RNU6-272P-201ENST00000411028 104 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 HSFY7P-201ENST00000432672 318 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 RPL21P112-201ENST00000434403 463 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 HSFY8P-201ENST00000437934 318 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AL158053.1-201ENST00000441503 453 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AL929288.2-201ENST00000446368 407 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 NPM1P49-201ENST00000448027 714 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 RPL23AP15-201ENST00000450202 459 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 SLC31A1P1-201ENST00000451221 567 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 AC097262.1-201ENST00000452559 548 ntBASIC3.93□□□□□ -1.78
CLIP2Q9UDT6 HSFY5P-201ENST00000453726 309 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms