Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AL606517.1-201ENST00000446914 387 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC239367.2-201ENST00000447309 705 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 TRGVB-201ENST00000453257 471 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 RPL21P134-201ENST00000453468 483 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 RPS4XP13-201ENST00000483219 789 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AL024509.2-201ENST00000493462 493 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 RN7SL323P-201ENST00000494712 295 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 RPL23AP55-201ENST00000498163 452 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 RNU6-311P-201ENST00000516224 102 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 MAGOH2P-202ENST00000584384 429 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC097478.2-201ENST00000610572 514 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC012531.5-201ENST00000611375 151 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC025588.4-201ENST00000615802 908 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AL354798.1-201ENST00000622505 329 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC004009.2-201ENST00000623016 728 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC005539.1-201ENST00000443768 1479 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AP002907.1-201ENST00000606361 1430 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 Y_RNA.192-201ENST00000363977 102 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 RN7SKP280-201ENST00000364196 304 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 SNORD116.1-201ENST00000365628 92 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 MIR30B-201ENST00000384850 88 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 HMGN2P8-201ENST00000391458 268 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 ATP5F1P1-201ENST00000433775 569 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 HSPE1P28-201ENST00000443139 211 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 PTENP1-201ENST00000447117 1215 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 ARPC3P5-201ENST00000448802 534 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC116353.3-201ENST00000511215 249 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 NDUFB4P9-201ENST00000511646 388 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 SUMO2P20-201ENST00000520803 283 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 MTND2P32-201ENST00000521584 1038 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC022695.1-201ENST00000522089 237 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC022861.1-201ENST00000522981 663 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 IGKV2D-19-201ENST00000523346 262 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AL512347.1-201ENST00000566420 503 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC087499.8-201ENST00000578406 226 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 XIAPP1-201ENST00000603162 600 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AC092653.1-201ENST00000608509 531 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 AP001002.2-201ENST00000625137 386 ntBASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
BLOC1S4Q9NUP1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 OR5BR1P-201ENST00000524992 1330 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 RNA5SP479-201ENST00000364858 117 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 CYCSP45-201ENST00000402289 315 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 RNU6-628P-201ENST00000410675 107 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 MTND2P9-201ENST00000422293 931 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 MTCO2P5-201ENST00000422621 426 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms