Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 RNU6-621P-201ENST00000364752 109 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AP002088.1-201ENST00000382740 395 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 SNORA57.1-201ENST00000391227 145 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 RPL21P17-201ENST00000397467 475 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 RPL23AP47-201ENST00000408017 460 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 MIR1193-201ENST00000408109 78 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 SYF2P2-201ENST00000417620 583 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AL365203.2-201ENST00000423444 196 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 MTND4P20-201ENST00000424125 869 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AL050321.1-201ENST00000432363 400 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AL445567.1-201ENST00000439121 144 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 MTCYBP34-201ENST00000439552 670 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 RPL23AP15-201ENST00000450202 459 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 RPS15AP1-201ENST00000457423 391 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 APOOP2-201ENST00000461561 539 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 RNU6-202P-201ENST00000515998 96 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 MIR2276-201ENST00000516886 89 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 MTCYBP27-201ENST00000555160 670 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AC090888.1-201ENST00000561335 1141 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 MIR4425-201ENST00000580572 84 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AL592221.1-201ENST00000605266 382 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AL391497.1-201ENST00000608671 547 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AC243756.2-201ENST00000618406 463 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 U7.8-201ENST00000619968 63 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AP003355.3-201ENST00000623465 114 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 MFSD8-233ENST00000641482 4860 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AC005539.1-201ENST00000443768 1479 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 ZNF542P-204ENST00000482727 1305 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 MIR184-201ENST00000384962 84 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 SKINT1L-201ENST00000401057 817 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 PRRC2CP1-201ENST00000404428 159 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 CYCSP19-201ENST00000411715 316 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 PRELID3BP11-201ENST00000414230 479 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 FCF1P2-201ENST00000415284 583 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 BOLA3P4-201ENST00000418151 400 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC098592.1-201ENST00000419352 333 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC009237.2-201ENST00000421358 284 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AL354941.1-201ENST00000438600 464 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AL357552.1-201ENST00000445254 415 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 MTCYBP3-201ENST00000445588 1137 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AL606662.1-201ENST00000445763 553 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 U3.44-201ENST00000458938 192 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 MTND1P16-201ENST00000465177 898 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 PLGLA-201ENST00000465668 449 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC005726.1-201ENST00000494679 427 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 RPF2P2-201ENST00000504693 896 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 MTND1P22-201ENST00000510572 951 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 ARL2BPP6-201ENST00000512757 439 ntBASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
SIX2Q9NPC8 AP001189.2-201ENST00000527320 189 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms