Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRC40Q9H9A6 AL356274.2-201ENST00000624379 3752 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 RPL7P26-201ENST00000333817 754 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 SNORD17-201ENST00000390930 237 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AL121978.1-201ENST00000402778 359 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AL591034.1-201ENST00000407447 340 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AL023807.1-201ENST00000407932 359 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 YPEL5P1-201ENST00000419731 367 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC127537.2-201ENST00000439258 465 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 RPL17P49-201ENST00000443728 411 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 GXYLT1P1-201ENST00000446657 490 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 HMGN1P18-201ENST00000457642 277 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC025518.1-201ENST00000479856 347 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC109471.1-201ENST00000511631 612 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 HMGN1P15-201ENST00000513870 295 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC026403.1-201ENST00000518938 295 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC004024.1-201ENST00000549244 247 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC006130.2-201ENST00000586202 326 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC009948.4-201ENST00000604692 675 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC006329.2-201ENST00000611491 394 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AC039056.2-201ENST00000622261 511 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 AL356863.1-201ENST00000623378 1080 ntBASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LRRC40Q9H9A6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 ZNF849P-201ENST00000594711 1566 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC002546.1-201ENST00000588041 2504 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC111188.2-201ENST00000529697 1387 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 RNU4-35P-201ENST00000362588 141 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 RNA5SP197-201ENST00000363357 119 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 MIR218-2-201ENST00000385006 110 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 GSTA8P-201ENST00000404253 637 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 RNA5SP107-201ENST00000411358 122 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 KCTD10P1-201ENST00000434203 625 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AL359073.1-201ENST00000448036 403 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 NDUFA5P7-201ENST00000452914 242 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 RN7SL542P-201ENST00000467147 294 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC017015.1-201ENST00000477387 286 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 MTCO1P49-201ENST00000523429 802 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AP001029.3-201ENST00000588063 596 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 MIR8084-201ENST00000614105 89 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AL590240.3-201ENST00000621416 943 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC091948.2-201ENST00000636510 279 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC244258.1-201ENST00000637553 1071 ntBASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC40Q9H9A6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 CR383658.2-201ENST00000547576 1525 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC244517.1-201ENST00000606030 2086 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 RNU6-619P-201ENST00000365146 108 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC025750.1-201ENST00000399891 379 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC109780.2-201ENST00000413467 845 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC012065.2-201ENST00000421295 375 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC234064.1-201ENST00000436312 247 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 TRBV26-201ENST00000456572 344 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms