Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RPS20P32-201ENST00000456044 356 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 PABPC1P3-201ENST00000469174 459 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 RPL7AP6-201ENST00000477943 801 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 RN7SL591P-201ENST00000496150 292 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC103851.1-201ENST00000506833 274 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC022861.1-201ENST00000522981 663 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 ZNF705CP-201ENST00000530515 889 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC087241.2-201ENST00000535801 324 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC023050.3-201ENST00000541142 333 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC009248.2-201ENST00000619826 254 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 AC107081.3-201ENST00000612715 2034 ntBASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXP3Q9BZS1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AL672167.1-204ENST00000641875 3017 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 RPL7P26-201ENST00000333817 754 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 RNU6-1097P-201ENST00000363586 107 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 RNU6-441P-201ENST00000384545 106 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 MIR649-201ENST00000384843 97 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AL359643.1-201ENST00000404109 423 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AL035079.1-201ENST00000405210 287 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 RN7SKP140-201ENST00000411196 284 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 MTCO3P12-201ENST00000416718 547 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AL807761.1-201ENST00000417622 171 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 NCOR1P3-201ENST00000420479 303 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 OR2AH1P-201ENST00000425717 928 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 OR2B7P-201ENST00000429302 934 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 RBMY2QP-201ENST00000429799 1147 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 YWHAZP8-201ENST00000436935 731 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 BNIP3P2-201ENST00000441221 577 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AL031584.1-201ENST00000447169 754 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 RPL21P6-201ENST00000479171 504 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 RN7SL447P-201ENST00000494711 245 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC231760.1-201ENST00000498002 260 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 GAPDHP56-201ENST00000506031 988 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC022616.3-201ENST00000523940 148 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AL353997.4-201ENST00000586196 166 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 BNIP3P22-201ENST00000593399 556 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AL133255.1-201ENST00000606374 441 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 Mico1.1-201ENST00000611698 204 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 CR392039.4-201ENST00000624968 501 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC011493.1-201ENST00000596753 1632 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 AC092125.1-201ENST00000562568 1995 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 HSPA8P18-201ENST00000439846 1928 ntBASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXP3Q9BZS1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXP3Q9BZS1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms