Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNA5SP219-201ENST00000390940 113 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 MIR1298-201ENST00000408783 112 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RNU2-33P-201ENST00000410344 192 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RN7SKP126-201ENST00000411143 300 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RPL7P37-201ENST00000425095 738 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC114495.1-201ENST00000441274 436 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RPS3AP46-201ENST00000448352 682 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC245028.2-201ENST00000458673 253 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 snoU13.1-201ENST00000459157 104 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC104472.2-201ENST00000469035 601 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 GLRXP3-201ENST00000470810 321 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RN7SL561P-201ENST00000488553 281 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC023424.1-201ENST00000496058 459 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RNU6-397P-201ENST00000516226 104 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC011979.2-201ENST00000527568 352 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC011487.3-201ENST00000593607 453 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC005344.1-201ENST00000613391 459 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AL445363.3-201ENST00000623080 671 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 U6.114-201ENST00000636407 96 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 AL589993.1-201ENST00000407450 2524 ntBASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 CUBNP3-201ENST00000457461 1784 ntBASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 NCOA4P3-201ENST00000513203 1877 ntBASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL25A1Q9BXS0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AL359893.1-201ENST00000447628 1580 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC093909.5-201ENST00000621839 1799 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AL161781.1-201ENST00000354277 403 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 U3.11-201ENST00000364476 212 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 Y_RNA.352-201ENST00000365439 102 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 RNU6-128P-201ENST00000383976 107 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 RNU6-22P-201ENST00000384355 107 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC097374.1-203ENST00000400783 485 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AL356421.1-201ENST00000403255 413 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AL603910.2-201ENST00000407268 136 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 RNA5SP44-201ENST00000410446 133 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 RNU6-1203P-201ENST00000410703 110 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 RNU2-25P-201ENST00000411041 191 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 RNU6-479P-201ENST00000516348 105 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AP002392.1-201ENST00000537692 208 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 MIR3124-201ENST00000582636 67 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC120057.5-201ENST00000623840 154 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC074029.4-201ENST00000624796 1859 ntBASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
COL25A1Q9BXS0 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL25A1Q9BXS0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms