Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC127381.1-201ENST00000555979 939 ntBASIC6.53□□□□□ -1.36
PHOX2BQ99453 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.53□□□□□ -1.36
PHOX2BQ99453 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.53□□□□□ -1.36
PHOX2BQ99453 AC010463.3-201ENST00000594077 500 ntBASIC6.53□□□□□ -1.36
PHOX2BQ99453 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.53□□□□□ -1.36
PHOX2BQ99453 AL160281.1-201ENST00000605307 311 ntBASIC6.53□□□□□ -1.36
PHOX2BQ99453 AL355333.1-201ENST00000605632 279 ntBASIC6.53□□□□□ -1.36
PHOX2BQ99453 RNU6-85P-201ENST00000605989 107 ntBASIC6.53□□□□□ -1.36
PHOX2BQ99453 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PHOX2BQ99453 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PHOX2BQ99453 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PHOX2BQ99453 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PHOX2BQ99453 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PHOX2BQ99453 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.53□□□□□ -1.36
PHOX2BQ99453 AC068870.1-201ENST00000563737 2455 ntBASIC6.53□□□□□ -1.36
PHOX2BQ99453 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
PHOX2BQ99453 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PHOX2BQ99453 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PHOX2BQ99453 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.53□□□□□ -1.36
PHOX2BQ99453 AC022164.1-201ENST00000568767 2673 ntBASIC6.53□□□□□ -1.36
PHOX2BQ99453 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
PHOX2BQ99453 AC027228.2-201ENST00000567141 2154 ntBASIC6.52□□□□□ -1.36
PHOX2BQ99453 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 AP003175.1-201ENST00000641383 6658 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 SNORA38B-201ENST00000363524 131 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 Y_RNA.270-201ENST00000364693 104 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AL445529.1-201ENST00000398713 389 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC099677.1-201ENST00000420575 175 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 Z92846.1-201ENST00000456203 268 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC010683.1-201ENST00000473673 378 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 SNORA31.6-201ENST00000516241 130 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 OR4H6P-201ENST00000563771 921 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC090517.1-201ENST00000569307 266 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC012433.1-201ENST00000588916 398 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 OR1M4P-201ENST00000589199 287 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC104687.2-201ENST00000604442 342 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC006023.2-201ENST00000609916 167 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 AC104581.5-201ENST00000624171 7141 ntBASIC6.52□□□□□ -1.37
PHOX2BQ99453 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.52□□□□□ -1.37
PHOX2BQ99453 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PHOX2BQ99453 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PHOX2BQ99453 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PHOX2BQ99453 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PHOX2BQ99453 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PHOX2BQ99453 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PHOX2BQ99453 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PHOX2BQ99453 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 RNU6-746P-201ENST00000384112 109 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 RNU6-611P-201ENST00000384276 104 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 AL030996.1-201ENST00000411430 235 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 AC099336.2-201ENST00000422457 254 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 SRSF1P1-201ENST00000424058 520 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 AC099560.2-201ENST00000457554 255 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 RPL21P41-201ENST00000459863 264 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 PPIAP21-201ENST00000464473 501 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 VN1R105P-201ENST00000486595 910 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 AC027801.3-201ENST00000515049 698 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 RNA5SP228-201ENST00000516232 133 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 RN7SKP82-201ENST00000516786 223 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 RN7SKP92-201ENST00000517266 244 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 AC022080.3-201ENST00000544433 482 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 HMGN2P47-201ENST00000559378 272 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 AC018552.1-201ENST00000562099 811 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 AL355877.2-201ENST00000603670 358 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms