Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC006504.8-201ENST00000621046 635 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC139792.3-201ENST00000623525 224 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC092079.1-201ENST00000558620 1985 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC126323.6-202ENST00000568092 3511 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 PHKBP1-201ENST00000450951 1951 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 CYP1D1P-201ENST00000416662 1433 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-1339P-201ENST00000363574 91 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-398P-201ENST00000384143 109 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-574P-201ENST00000384265 107 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 MT-TR-201ENST00000387439 65 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RNA5SP397-201ENST00000391323 118 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 SDHCP2-201ENST00000398565 501 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AL122016.1-201ENST00000403365 367 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RAD23BP1-201ENST00000421404 1227 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AL592293.2-201ENST00000422292 996 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 NPM1P34-201ENST00000428821 893 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 BMS1P19-201ENST00000433925 393 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC024082.2-201ENST00000434771 238 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC002486.1-201ENST00000435098 391 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC009961.2-201ENST00000435771 251 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RPL37P21-201ENST00000435890 276 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC004938.1-201ENST00000438468 308 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 CEACAMP9-201ENST00000442990 513 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 MTND6P13-201ENST00000443510 523 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RPL36AP15-201ENST00000444514 266 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 MRPL50P4-201ENST00000446432 475 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC140076.1-201ENST00000449897 361 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 SNRPGP6-201ENST00000451124 220 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-420P-201ENST00000458780 107 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC091564.1-201ENST00000464563 479 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RN7SL738P-201ENST00000470264 297 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 IGLV2-34-201ENST00000490007 283 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 UBA52P3-201ENST00000491303 382 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC010486.1-201ENST00000511793 424 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 HMGB1P23-201ENST00000518743 568 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC011712.1-201ENST00000588959 234 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 PRELID3BP8-201ENST00000604148 295 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC106900.2-201ENST00000604994 317 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AL356274.1-201ENST00000617064 410 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC131238.1-201ENST00000617135 328 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC015914.2-201ENST00000618167 288 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AC092650.2-201ENST00000619984 902 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 MIR1302-1-201ENST00000637932 143 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 AL451142.2-201ENST00000429076 2090 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 MFSD8-242ENST00000641690 4199 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 OR5BR1P-201ENST00000524992 1330 ntBASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDK5RAP1Q96SZ6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK5RAP1Q96SZ6 DHX40P1-201ENST00000588725 1412 ntBASIC4.9□□□□□ -1.62
CDK5RAP1Q96SZ6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK5RAP1Q96SZ6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK5RAP1Q96SZ6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CDK5RAP1Q96SZ6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK5RAP1Q96SZ6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDK5RAP1Q96SZ6 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 OR52B1P-201ENST00000316506 909 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 SNORA70F-201ENST00000384142 135 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-533P-201ENST00000384144 107 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-98P-201ENST00000384173 107 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-1122P-201ENST00000384449 107 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 MIR16-1-201ENST00000385271 89 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms