Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 RPL23AP89-201ENST00000439324 255 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 AL121871.1-201ENST00000443413 436 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 AL606517.1-201ENST00000446914 387 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 AC023424.2-201ENST00000493479 777 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 RPS27AP13-201ENST00000498403 237 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 RNA5SP49-201ENST00000516450 115 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 IGKV2D-23-201ENST00000518179 286 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SKA1Q96BD8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SKA1Q96BD8 AC079171.1-201ENST00000568788 914 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 RPL23AP87-202ENST00000573039 466 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 AC022916.3-201ENST00000592961 742 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 AL451086.1-201ENST00000605596 223 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 RNU4-89P-201ENST00000607443 133 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
SKA1Q96BD8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
SKA1Q96BD8 AC015967.1-201ENST00000619893 476 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 AC013470.4-201ENST00000619978 986 ntBASIC4.29□□□□□ -1.72
SKA1Q96BD8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SKA1Q96BD8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SKA1Q96BD8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SKA1Q96BD8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SKA1Q96BD8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SKA1Q96BD8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SKA1Q96BD8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SKA1Q96BD8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 RNU6-1242P-201ENST00000391052 103 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 AL138878.1-201ENST00000405131 347 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 AL356131.1-201ENST00000405826 414 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 RPL7P30-201ENST00000420888 709 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 AC007742.1-201ENST00000425789 329 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 ELOCP26-201ENST00000436067 329 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 RPL23AP46-201ENST00000438548 490 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 AC006517.1-201ENST00000480485 328 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 MTND2P32-201ENST00000521584 1038 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 CR383656.7-201ENST00000548164 174 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 SYF2P1-201ENST00000550658 413 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 AL360157.1-201ENST00000565962 87 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 AC009101.1-201ENST00000568135 242 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 AC245297.2-201ENST00000610119 565 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 VIS1.1-201ENST00000610517 203 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SKA1Q96BD8 AP001486.2-201ENST00000561652 5113 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.28□□□□□ -1.72
SKA1Q96BD8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SKA1Q96BD8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
SKA1Q96BD8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.27□□□□□ -1.73
SKA1Q96BD8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.27□□□□□ -1.73
SKA1Q96BD8 MTND5P24-201ENST00000438892 1767 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SKA1Q96BD8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SKA1Q96BD8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SKA1Q96BD8 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SKA1Q96BD8 RNU1-14P-201ENST00000362759 152 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SKA1Q96BD8 SNORD66.1-201ENST00000391230 76 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 RN7SKP202-201ENST00000410439 330 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 RN7SKP182-201ENST00000410772 298 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SKA1Q96BD8 RPL7P2-201ENST00000427639 268 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.27□□□□□ -1.73
SKA1Q96BD8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.27□□□□□ -1.73
SKA1Q96BD8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.27□□□□□ -1.73
SKA1Q96BD8 SDCBPP1-201ENST00000440192 890 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 RPL23AP81-201ENST00000455252 467 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 RPL23AP31-201ENST00000456160 467 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 AC108729.1-201ENST00000487812 947 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.27□□□□□ -1.73
SKA1Q96BD8 HMGB3P15-201ENST00000507326 574 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 RNU6-415P-201ENST00000516252 97 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 DEFB131D-201ENST00000526803 184 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 AC105233.3-201ENST00000531125 744 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 SNRPGP16-201ENST00000533275 226 ntBASIC4.27□□□□□ -1.73
SKA1Q96BD8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SKA1Q96BD8 TRAV8-5-201ENST00000537369 341 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms