Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 MIR5186-201ENST00000577504 120 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AL353748.2-201ENST00000622148 471 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AP000346.3-201ENST00000622821 210 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AL078595.3-201ENST00000623815 1166 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AP001002.2-201ENST00000625137 386 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AC116618.1-201ENST00000634617 774 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AC024560.2-201ENST00000507981 1497 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 OR4G11P-202ENST00000642116 1414 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
VPS33AQ96AX1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.81
VPS33AQ96AX1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
VPS33AQ96AX1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC002546.1-201ENST00000588041 2504 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 MTND5P24-201ENST00000438892 1767 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RNU1-18P-201ENST00000363062 164 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RNA5SP399-201ENST00000364003 117 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 DEFB109C-201ENST00000382575 264 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 DEFB109B-201ENST00000382656 264 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RNU6-1242P-201ENST00000391052 103 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RNU11-4P-201ENST00000391149 133 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RNA5SP129-201ENST00000410276 118 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RPL7AP73-201ENST00000413490 353 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 OR5BE1P-201ENST00000425977 939 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 SNORA71B-202ENST00000439232 272 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AL606517.1-201ENST00000446914 387 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RPS17P13-201ENST00000448974 407 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RPS4XP10-201ENST00000465034 731 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RN7SL303P-201ENST00000469773 251 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 HMGB3P15-201ENST00000507326 574 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 DEFB131D-201ENST00000526803 184 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 SYF2P1-201ENST00000550658 413 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC234771.5-201ENST00000600161 514 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC104785.1-201ENST00000603220 588 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC019193.2-201ENST00000610012 634 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC097478.2-201ENST00000610572 514 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AL357080.1-201ENST00000617394 239 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AL596245.1-201ENST00000618994 362 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC231657.1-201ENST00000624313 397 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 OR5BE1P-202ENST00000641168 1176 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC005539.1-201ENST00000443768 1479 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 AC012618.3-205ENST00000637896 1496 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 PRO1804-201ENST00000623780 2050 ntBASIC3.77□□□□□ -1.81
VPS33AQ96AX1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS33AQ96AX1 LARP1BP1-201ENST00000506036 1359 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 AP001148.1-201ENST00000624124 2359 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 AL031679.1-201ENST00000400616 525 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 AL356131.1-201ENST00000405826 414 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 MIR1284-201ENST00000408337 120 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 RPL37P18-201ENST00000411602 243 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 TPMTP2-201ENST00000414372 726 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 RANP8-201ENST00000444720 713 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 RPS11P1-201ENST00000451072 473 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 snoU13.1-201ENST00000459157 104 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 RN7SL738P-201ENST00000470264 297 ntBASIC3.76□□□□□ -1.81
VPS33AQ96AX1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS33AQ96AX1 AC093278.1-201ENST00000494700 600 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms