Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 HMGB1P17-201ENST00000403495 628 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AL138880.1-201ENST00000405824 642 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 RNU4-25P-201ENST00000410569 230 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 ELOCP19-201ENST00000411919 318 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 AL592293.2-201ENST00000422292 996 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 RPL21P112-201ENST00000434403 463 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 SKP1P1-201ENST00000438081 489 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC083863.1-201ENST00000438811 231 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC092473.1-201ENST00000441098 221 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 PTENP1-201ENST00000447117 1215 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 RPS29P33-201ENST00000456717 146 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 RPL23AP14-201ENST00000468281 468 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC020898.1-201ENST00000474167 787 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 RN7SL459P-201ENST00000481078 302 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC007686.1-201ENST00000488511 463 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 WBP1LP4-201ENST00000505043 344 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC109445.1-201ENST00000512356 383 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 RNU6-583P-201ENST00000516012 92 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 RN7SKP287-201ENST00000516546 266 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 HSPA8P13-201ENST00000523715 472 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 PSMB7P1-201ENST00000556349 514 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 MIR5684-201ENST00000585074 65 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 DUXAP3-201ENST00000603616 594 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC009220.3-201ENST00000604318 586 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 BRDTP1-201ENST00000605735 677 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC092653.1-201ENST00000608509 531 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC099778.2-201ENST00000610904 211 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC093783.1-201ENST00000612976 329 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC069209.1-201ENST00000619282 651 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC120349.3-201ENST00000624377 529 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 AC011944.2-201ENST00000624440 683 ntBASIC3.48□□□□□ -1.85
RFT1Q96AA3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
RFT1Q96AA3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFT1Q96AA3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC244517.1-201ENST00000606030 2086 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 RNA5SP509-201ENST00000364577 119 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 RNU6-878P-201ENST00000384578 110 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 HLFP1-201ENST00000402375 499 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 RPL21P109-201ENST00000422213 475 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 OR5BE1P-201ENST00000425977 939 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 NIPA2P1-201ENST00000426223 976 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 EZH2P1-201ENST00000431167 291 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RFT1Q96AA3 CR769776.1-201ENST00000441254 787 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC239367.2-201ENST00000447309 705 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 HMGB3P8-201ENST00000449709 577 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 RPS24P6-201ENST00000452670 400 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC114981.1-201ENST00000503897 678 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC093840.1-201ENST00000511599 336 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC026412.2-201ENST00000512270 1075 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC006499.2-201ENST00000513470 337 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 RNU6-27P-201ENST00000516146 107 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 RN7SKP83-201ENST00000516512 178 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 NBEAP1-201ENST00000554452 979 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 MTND4P33-201ENST00000556706 766 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 MIR4277-201ENST00000578298 84 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 MIR4330-201ENST00000579077 105 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC093424.1-201ENST00000604999 338 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC097065.2-201ENST00000608159 533 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC243773.3-201ENST00000613270 256 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.47□□□□□ -1.85
RFT1Q96AA3 AC091905.1-201ENST00000624400 311 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 OR5BE1P-202ENST00000641168 1176 ntBASIC3.47□□□□□ -1.85
RFT1Q96AA3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms