Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC4Q92889 RNU6-441P-201ENST00000384545 106 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 RPL31P52-201ENST00000407532 367 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AL133384.1-201ENST00000412744 351 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.16□□□□□ -1.58
ERCC4Q92889 TPMTP2-201ENST00000414372 726 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.16□□□□□ -1.58
ERCC4Q92889 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.16□□□□□ -1.58
ERCC4Q92889 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.16□□□□□ -1.58
ERCC4Q92889 C1DP2-201ENST00000418167 426 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.16□□□□□ -1.58
ERCC4Q92889 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.16□□□□□ -1.58
ERCC4Q92889 AC023347.2-201ENST00000433994 462 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AC009961.2-201ENST00000435771 251 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC4Q92889 GAPDHP17-201ENST00000449858 1001 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.16□□□□□ -1.58
ERCC4Q92889 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AL359385.1-201ENST00000456509 365 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 RPS5P7-201ENST00000456664 608 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 OR6K1P-201ENST00000456766 971 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 BTF3P5-201ENST00000457252 467 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AC013267.1-201ENST00000458227 267 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AC063943.1-201ENST00000465434 453 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 RPL31P50-201ENST00000471002 296 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 FCF1P3-201ENST00000496394 590 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 FAM92A1P2-202ENST00000504766 877 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC4Q92889 RNU6-528P-201ENST00000516926 100 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.16□□□□□ -1.58
ERCC4Q92889 AC090281.1-201ENST00000523019 276 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 MTND4LP18-201ENST00000526864 291 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.16□□□□□ -1.58
ERCC4Q92889 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC4Q92889 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.16□□□□□ -1.58
ERCC4Q92889 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.16□□□□□ -1.58
ERCC4Q92889 EDDM3DP-201ENST00000554692 434 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 MIR4436B2-201ENST00000581415 91 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 MIR4436B1-201ENST00000583272 91 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AC091965.4-201ENST00000607691 587 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 MIR3688-2-201ENST00000636963 87 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 XPOTP1-201ENST00000443317 2398 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC4Q92889 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.16□□□□□ -1.58
ERCC4Q92889 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
ERCC4Q92889 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC4Q92889 AC017104.4-201ENST00000636283 1592 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
ERCC4Q92889 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC4Q92889 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC4Q92889 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.15□□□□□ -1.58
ERCC4Q92889 AC010928.1-201ENST00000592477 1447 ntBASIC5.15□□□□□ -1.58
ERCC4Q92889 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC4Q92889 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.15□□□□□ -1.58
ERCC4Q92889 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
ERCC4Q92889 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
ERCC4Q92889 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
ERCC4Q92889 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ERCC4Q92889 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ERCC4Q92889 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ERCC4Q92889 MIR649-201ENST00000384843 97 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 RNU6-952P-201ENST00000391164 108 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 SNORD115-47-201ENST00000391226 86 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 DHFRP6-201ENST00000401776 268 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 MIR320C1-201ENST00000408566 88 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC4Q92889 USP9YP6-201ENST00000413550 854 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.15□□□□□ -1.59
ERCC4Q92889 RPS20P1-201ENST00000434853 354 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AC073614.1-201ENST00000438690 650 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC4Q92889 RPL23AP16-201ENST00000441715 421 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 MTATP6P30-201ENST00000443540 664 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC4Q92889 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC4Q92889 EEF1A1P1-201ENST00000447052 739 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC4Q92889 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.15□□□□□ -1.59
ERCC4Q92889 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.15□□□□□ -1.59
ERCC4Q92889 USP9YP34-201ENST00000453983 808 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AC017015.1-201ENST00000477387 286 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 RPL36AP41-201ENST00000493820 306 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.15□□□□□ -1.59
ERCC4Q92889 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.15□□□□□ -1.59
ERCC4Q92889 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.15□□□□□ -1.59
ERCC4Q92889 PTGES3P3-201ENST00000511479 482 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 ARL2BPP6-201ENST00000512757 439 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AC018797.3-201ENST00000513388 1241 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 MYL12AP1-201ENST00000518490 515 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AP003467.2-201ENST00000520175 319 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC4Q92889 OR5AP1P-201ENST00000529730 940 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.15□□□□□ -1.59
ERCC4Q92889 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC4Q92889 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.15□□□□□ -1.59
ERCC4Q92889 AC009117.1-201ENST00000563948 554 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 LARP7P2-201ENST00000575306 125 ntBASIC5.15□□□□□ -1.59
ERCC4Q92889 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms