Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC005517.2-201ENST00000424673 553 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 PSMA6P3-201ENST00000428242 164 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AL365184.2-201ENST00000431139 435 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 PRELID3BP10-201ENST00000431957 584 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC010153.1-201ENST00000432862 727 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 LSM1P1-201ENST00000438629 273 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 THAP5P1-201ENST00000439089 262 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AL357520.1-201ENST00000441557 453 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC002381.1-201ENST00000447049 280 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 RPL29P29-201ENST00000448725 423 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 SUMO2P2-201ENST00000456482 255 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 MTCO2P18-201ENST00000457151 658 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC116337.2-201ENST00000477662 156 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 RAP1BP2-201ENST00000478270 544 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC024589.1-201ENST00000512207 263 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC099522.1-202ENST00000514718 367 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AL139174.1-201ENST00000531489 886 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 PDCD5P1-201ENST00000543528 309 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 OR6C7P-201ENST00000547875 934 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 U73023.1-201ENST00000603134 700 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 Z98200.1-201ENST00000607298 470 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC097468.3-201ENST00000607956 456 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC012360.2-201ENST00000609349 391 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC006133.1-201ENST00000617106 264 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AP001273.1-201ENST00000624493 3152 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AL133243.3-201ENST00000617415 3004 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 MTCO1P24-201ENST00000515438 1558 ntBASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB4Q8WW32 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 U3.4-201ENST00000363352 213 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 SNORD96B-201ENST00000386148 79 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 MIR670-201ENST00000390142 98 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 CYCSP19-201ENST00000411715 316 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AL590233.1-201ENST00000430017 456 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 RPS29P7-201ENST00000439662 171 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 RPL23AP33-201ENST00000442301 452 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 COX6CP2-201ENST00000444980 225 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 BMI1P1-201ENST00000445879 941 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 PAXBP1P1-201ENST00000449315 447 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 RPL5P32-201ENST00000454085 879 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC087312.1-201ENST00000471411 480 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC017015.1-201ENST00000477387 286 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AP002812.1-201ENST00000495378 474 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 POU5F1P7-201ENST00000508759 541 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 OR5AP1P-201ENST00000529730 940 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC012414.6-201ENST00000568241 401 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC053481.4-201ENST00000583164 216 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 MIR3158-1-201ENST00000583596 81 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.3□□□□□ -1.72
HMGB4Q8WW32 HMGB2P1-201ENST00000591146 634 ntBASIC4.3□□□□□ -1.72
HMGB4Q8WW32 BBIP1P1-201ENST00000602999 279 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms