Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 RIOK3P1-201ENST00000418778 1528 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 SNORA63.3-201ENST00000362682 132 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 SNORA71.1-201ENST00000364523 117 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 SNORA70E-201ENST00000384492 135 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 RNU6-1151P-201ENST00000384684 107 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 DSTNP4-201ENST00000399472 474 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 RHEBP3-201ENST00000411920 351 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 RPL23AP82-202ENST00000427528 469 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AL365396.1-201ENST00000430854 671 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 CST9LP2-201ENST00000437612 320 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 BX276092.4-201ENST00000452056 248 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 RPL12P26-201ENST00000452430 487 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 CDC42P1-201ENST00000456658 548 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 CENPBD1P1-201ENST00000464061 469 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 RPL21P103-201ENST00000479921 488 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 ACTG1P13-201ENST00000486987 1043 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 NIPA2P2-201ENST00000496376 1083 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC068305.1-201ENST00000497406 726 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC069306.1-201ENST00000507006 843 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC026801.2-201ENST00000515352 425 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 MTND1P36-201ENST00000522384 936 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC092451.2-201ENST00000538746 658 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC074029.1-201ENST00000552531 1044 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 VN1R79P-201ENST00000593540 513 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AL020997.3-201ENST00000602843 359 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC083899.3-201ENST00000603413 594 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 IGHV3-29-201ENST00000604817 344 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC120053.1-201ENST00000607706 736 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 uc_338.25-201ENST00000613756 156 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC078880.5-201ENST00000617845 421 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AL590240.3-201ENST00000621416 943 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC007998.5-201ENST00000622938 237 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AC006065.5-201ENST00000623427 349 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LINC01560Q8TB33 AL136964.1-201ENST00000622038 2990 ntBASIC2.75□□□□□ -1.97
LINC01560Q8TB33 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 ANKRD36P1-201ENST00000344424 659 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 RNU6-207P-201ENST00000384137 107 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 SNORA7.4-201ENST00000384249 137 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 ARF4P3-201ENST00000397387 509 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 RNA5SP239-201ENST00000410218 129 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 RPL31P45-201ENST00000419532 356 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 FTH1P6-201ENST00000430768 320 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 OR51B8P-201ENST00000449892 769 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 RPS15AP1-201ENST00000457423 391 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 SNORD108-201ENST00000459332 71 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 RNU7-140P-201ENST00000459546 60 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AC015908.1-201ENST00000478739 476 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AP000926.1-201ENST00000479573 241 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AC092902.1-201ENST00000486999 259 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 RPL7P47-201ENST00000497299 556 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 NAMPTP2-201ENST00000505629 1115 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 MTCO3P27-201ENST00000514397 196 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AC124293.1-201ENST00000530034 493 ntBASIC2.74□□□□□ -1.97
LINC01560Q8TB33 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01560Q8TB33 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms