Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 COX6CP8-201ENST00000522620 226 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AF127577.6-201ENST00000623352 2191 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC110754.1-201ENST00000399740 601 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 UQCRFS1P3-201ENST00000407697 385 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 PTGES3P5-201ENST00000455109 434 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC104687.1-201ENST00000485829 412 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC104027.1-201ENST00000521887 300 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 HIGD1AP10-201ENST00000527837 282 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 OR8X1P-201ENST00000534542 869 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC099336.2-201ENST00000422457 254 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 RPS24P13-201ENST00000442520 397 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AL354710.1-201ENST00000453641 246 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 SNRPGP3-201ENST00000469405 227 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC007336.1-201ENST00000576365 3828 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 NCSTNP1-201ENST00000406229 144 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC007390.1-201ENST00000415722 356 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC083906.5-201ENST00000503722 328 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 TXNP6-201ENST00000510190 310 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC005921.1-201ENST00000510589 286 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 IGKV2-36-201ENST00000519999 223 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 TRAV11-201ENST00000539512 339 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 ATP1B3P1-201ENST00000605365 821 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AL049780.3-201ENST00000624612 1583 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 SNORA67.4-201ENST00000384688 142 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 MIR196B-201ENST00000384852 84 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 MIR591-201ENST00000385290 95 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 RAP1BP1-201ENST00000412709 553 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AL513043.1-201ENST00000439124 535 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AL353093.1-201ENST00000441292 436 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 RNA5SP76-201ENST00000516277 87 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 AC091488.1-201ENST00000604239 660 ntBASIC0.85□□□□□ -2.27
SYNE1Q8NF91 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SYNE1Q8NF91 MAPK10-322ENST00000641485 4530 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 MIR221-201ENST00000385135 110 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 OFD1P1Y-201ENST00000411756 1225 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 SDCBPP3-201ENST00000419629 891 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 HMGN2P23-201ENST00000456759 269 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 MTCYBP14-201ENST00000457471 715 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 RNA5SP24-201ENST00000516478 95 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AP003122.3-201ENST00000526316 255 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AP001646.1-201ENST00000527936 915 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC243972.3-201ENST00000539655 198 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AL121839.1-201ENST00000556233 1185 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 SNORD39.4-201ENST00000620099 78 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC046144.1-201ENST00000478559 1853 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC048351.1-201ENST00000420064 602 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 RPS29P6-201ENST00000438196 145 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 CEACAMP4-201ENST00000457676 421 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 RPL9P32-201ENST00000464118 620 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC083760.1-201ENST00000589621 670 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AL159169.2-201ENST00000610061 1269 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC110792.3-201ENST00000595906 1614 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AL390023.1-201ENST00000428836 262 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC124916.1-201ENST00000444020 547 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 CFTRP1-201ENST00000456646 183 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC103975.1-201ENST00000482506 483 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 AC068781.1-201ENST00000488231 618 ntBASIC0.84□□□□□ -2.27
SYNE1Q8NF91 FCF1P8-201ENST00000510322 597 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms