Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 AL365361.1-201ENST00000566942 3481 ntBASIC3.79□□□□□ -1.8
VPS8Q8N3P4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 AC233263.6-201ENST00000631132 1963 ntBASIC3.79□□□□□ -1.8
VPS8Q8N3P4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS8Q8N3P4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 FAT1P1-201ENST00000406588 507 ntBASIC3.78□□□□□ -1.8
VPS8Q8N3P4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 AP000926.1-201ENST00000479573 241 ntBASIC3.78□□□□□ -1.8
VPS8Q8N3P4 AC098583.1-201ENST00000480875 255 ntBASIC3.78□□□□□ -1.8
VPS8Q8N3P4 LINC00888-204ENST00000487386 421 ntBASIC3.78□□□□□ -1.8
VPS8Q8N3P4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.78□□□□□ -1.8
VPS8Q8N3P4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 RANP7-201ENST00000418085 644 ntBASIC3.78□□□□□ -1.8
VPS8Q8N3P4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS8Q8N3P4 MIR4435-1-201ENST00000582552 80 ntBASIC3.78□□□□□ -1.8
VPS8Q8N3P4 SNORA35B-201ENST00000607417 129 ntBASIC3.78□□□□□ -1.8
VPS8Q8N3P4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
VPS8Q8N3P4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VPS8Q8N3P4 MTND4LP12-201ENST00000448237 295 ntBASIC3.77□□□□□ -1.81
VPS8Q8N3P4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.77□□□□□ -1.81
VPS8Q8N3P4 RN7SL636P-201ENST00000497504 294 ntBASIC3.77□□□□□ -1.81
VPS8Q8N3P4 RNA5SP385-201ENST00000515947 110 ntBASIC3.77□□□□□ -1.81
VPS8Q8N3P4 AL160237.3-201ENST00000604114 1013 ntBASIC3.77□□□□□ -1.81
VPS8Q8N3P4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS8Q8N3P4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS8Q8N3P4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VPS8Q8N3P4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS8Q8N3P4 RNVU1-3-201ENST00000364313 161 ntBASIC3.76□□□□□ -1.81
VPS8Q8N3P4 SNORA41-201ENST00000384675 132 ntBASIC3.76□□□□□ -1.81
VPS8Q8N3P4 AC013410.1-201ENST00000436223 1232 ntBASIC3.76□□□□□ -1.81
VPS8Q8N3P4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS8Q8N3P4 AC026412.2-201ENST00000512270 1075 ntBASIC3.76□□□□□ -1.81
VPS8Q8N3P4 AC108471.1-201ENST00000513977 287 ntBASIC3.76□□□□□ -1.81
VPS8Q8N3P4 SNORA70.14-201ENST00000516205 110 ntBASIC3.76□□□□□ -1.81
VPS8Q8N3P4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VPS8Q8N3P4 AL157394.1-201ENST00000562983 1224 ntBASIC3.76□□□□□ -1.81
VPS8Q8N3P4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS8Q8N3P4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS8Q8N3P4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VPS8Q8N3P4 CUL1P1-201ENST00000509510 2425 ntBASIC3.75□□□□□ -1.81
VPS8Q8N3P4 FRG1BP-201ENST00000278882 761 ntBASIC3.75□□□□□ -1.81
VPS8Q8N3P4 SNORA25.6-201ENST00000364121 118 ntBASIC3.75□□□□□ -1.81
VPS8Q8N3P4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS8Q8N3P4 RN7SKP140-201ENST00000411196 284 ntBASIC3.75□□□□□ -1.81
VPS8Q8N3P4 AC018634.1-201ENST00000437554 401 ntBASIC3.75□□□□□ -1.81
VPS8Q8N3P4 SNRPFP2-201ENST00000440710 251 ntBASIC3.75□□□□□ -1.81
VPS8Q8N3P4 AL645939.1-201ENST00000453429 797 ntBASIC3.75□□□□□ -1.81
VPS8Q8N3P4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.75□□□□□ -1.81
VPS8Q8N3P4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS8Q8N3P4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS8Q8N3P4 AC073348.1-201ENST00000623002 331 ntBASIC3.75□□□□□ -1.81
VPS8Q8N3P4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
VPS8Q8N3P4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS8Q8N3P4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS8Q8N3P4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 AC005183.1-201ENST00000603687 1979 ntBASIC3.74□□□□□ -1.81
VPS8Q8N3P4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 BTF3P7-201ENST00000407097 488 ntBASIC3.74□□□□□ -1.81
VPS8Q8N3P4 AL121890.1-201ENST00000435457 205 ntBASIC3.74□□□□□ -1.81
VPS8Q8N3P4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 AC104389.3-201ENST00000445629 235 ntBASIC3.74□□□□□ -1.81
VPS8Q8N3P4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 AC026436.1-201ENST00000510537 270 ntBASIC3.74□□□□□ -1.81
VPS8Q8N3P4 AP003467.2-201ENST00000520175 319 ntBASIC3.74□□□□□ -1.81
VPS8Q8N3P4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 AC046143.2-201ENST00000609789 160 ntBASIC3.74□□□□□ -1.81
VPS8Q8N3P4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS8Q8N3P4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 EXOC5P1-201ENST00000510543 1969 ntBASIC3.73□□□□□ -1.81
VPS8Q8N3P4 SNORA3.2-201ENST00000408221 125 ntBASIC3.73□□□□□ -1.81
VPS8Q8N3P4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 OR5H5P-201ENST00000503164 928 ntBASIC3.73□□□□□ -1.81
VPS8Q8N3P4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 ACTR6P1-201ENST00000514311 1104 ntBASIC3.73□□□□□ -1.81
VPS8Q8N3P4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS8Q8N3P4 AL136964.1-201ENST00000622038 2990 ntBASIC3.73□□□□□ -1.81
VPS8Q8N3P4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VPS8Q8N3P4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms