Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Z98941.1-201ENST00000407764 100 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 RNU2-28P-201ENST00000410457 189 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 FCF1P9-201ENST00000412546 282 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 RPS7P13-201ENST00000413955 498 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 EIF1P3-201ENST00000423841 334 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AL512649.1-201ENST00000428997 581 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 VDAC1P6-201ENST00000430062 855 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 MTND1P28-201ENST00000435623 950 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 YWHAZP8-201ENST00000436935 731 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AF228730.2-201ENST00000438784 848 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AL831737.1-201ENST00000441288 271 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 TPT1P7-201ENST00000458300 517 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC010683.1-201ENST00000473673 378 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 KLRA1P-201ENST00000503499 986 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC025554.1-201ENST00000505641 188 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 CR383656.6-201ENST00000550518 394 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 CYCSP2-201ENST00000558168 301 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC136618.2-201ENST00000575091 400 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AP001004.1-201ENST00000582468 324 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC091805.2-201ENST00000603848 235 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 NDUFA8P1-201ENST00000605525 367 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC090186.1-201ENST00000605991 572 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC064801.1-201ENST00000612025 407 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 RNU6-156P-201ENST00000621869 107 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 NOL8P1-201ENST00000508336 3529 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 AC006971.1-201ENST00000407916 4486 ntBASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLIP4Q8N3C7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 RNU6-657P-201ENST00000383904 107 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 CYB5AP4-201ENST00000396692 399 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC136624.1-201ENST00000400791 413 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 RNU2-66P-201ENST00000410650 161 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC119751.6-201ENST00000416712 186 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AL157831.1-201ENST00000426134 473 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 OR2B8P-201ENST00000432841 938 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC092427.1-201ENST00000439177 601 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 PHBP16-201ENST00000446318 950 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 EEF1E1P1-201ENST00000446998 430 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 HMGN3P1-201ENST00000453847 193 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 RPL23AP81-201ENST00000455252 467 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 RN7SL98P-201ENST00000462271 300 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 RPL9P33-201ENST00000484311 566 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC011352.1-201ENST00000512300 793 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 RN7SKP96-201ENST00000516948 297 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 ARL2BPP5-201ENST00000523141 481 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 OR4A45P-201ENST00000529954 901 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 OR5AN2P-201ENST00000534535 896 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC074029.1-201ENST00000552531 1044 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 HMGB3P26-201ENST00000560051 582 ntBASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.92□□□□□ -1.78
CLIP4Q8N3C7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms