Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC090970.3-201ENST00000612566 866 ntBASIC5.07□□□□□ -1.6
SYNE4Q8N205 AC007014.2-201ENST00000615581 479 ntBASIC5.07□□□□□ -1.6
SYNE4Q8N205 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.07□□□□□ -1.6
SYNE4Q8N205 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.07□□□□□ -1.6
SYNE4Q8N205 AL356321.1-201ENST00000621360 228 ntBASIC5.07□□□□□ -1.6
SYNE4Q8N205 AC015726.3-201ENST00000624501 418 ntBASIC5.07□□□□□ -1.6
SYNE4Q8N205 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNE4Q8N205 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SYNE4Q8N205 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SYNE4Q8N205 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SYNE4Q8N205 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SYNE4Q8N205 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
SYNE4Q8N205 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE4Q8N205 MAPK10-286ENST00000641208 8747 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE4Q8N205 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE4Q8N205 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE4Q8N205 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE4Q8N205 DDX18P4-201ENST00000511690 1966 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 PCAT14-202ENST00000627127 3935 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 FGF7P2-201ENST00000332473 296 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 Y_RNA.256-201ENST00000364594 104 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 RNU6-621P-201ENST00000364752 109 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 CYCSP45-201ENST00000402289 315 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 Z97055.1-201ENST00000419730 712 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC091286.1-201ENST00000431233 461 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 SSXP1-201ENST00000453640 473 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 BX248409.1-201ENST00000455497 255 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 RPL5P24-201ENST00000463742 885 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC004924.1-201ENST00000480160 781 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 GAPDHP39-201ENST00000481866 979 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC098799.2-201ENST00000509466 868 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 RN7SKP31-201ENST00000516354 278 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 RNU7-143P-201ENST00000516781 65 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC087808.1-201ENST00000520501 361 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC063950.1-201ENST00000552036 308 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 MIR4528-201ENST00000577763 90 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC090312.1-201ENST00000580637 348 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC012065.4-201ENST00000602445 679 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC112220.3-201ENST00000605502 502 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AC009093.8-201ENST00000641769 292 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE4Q8N205 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE4Q8N205 AL353743.4-201ENST00000422653 1547 ntBASIC5.06□□□□□ -1.6
SYNE4Q8N205 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNE4Q8N205 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SYNE4Q8N205 HSPA8P17-201ENST00000427029 1382 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 Y_RNA.18-201ENST00000362461 102 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 Y_RNA.111-201ENST00000363248 100 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 Y_RNA.311-201ENST00000365068 96 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 MIR1271-201ENST00000408537 86 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AL109913.1-201ENST00000421173 514 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 ZNF863P-201ENST00000426746 417 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 TMX2P1-201ENST00000436507 708 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AL662791.1-201ENST00000441992 928 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 MTCO2P25-201ENST00000447065 681 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 RNA5SP269-201ENST00000459032 137 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 DYNLL1P6-201ENST00000503440 264 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC026427.2-201ENST00000506228 536 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC093853.1-201ENST00000515689 483 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 RNU6-506P-201ENST00000516553 94 ntBASIC5.05□□□□□ -1.6
SYNE4Q8N205 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.05□□□□□ -1.6
SYNE4Q8N205 IGLV3-26-201ENST00000520756 302 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms