Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MTND5P2-201ENST00000442927 1142 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 USP9YP34-201ENST00000453983 808 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 RPL7P1-201ENST00000468161 747 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 RPL7P9-201ENST00000468715 747 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 UBTFL6-201ENST00000477929 1024 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC006499.5-201ENST00000505037 514 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC109458.1-201ENST00000508858 316 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 RNU6-1129P-201ENST00000515964 104 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 RNU6-678P-201ENST00000516832 109 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 RNU4-60P-201ENST00000517239 135 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 MYL12AP1-201ENST00000518490 515 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 MAGOH2P-202ENST00000584384 429 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC008759.1-201ENST00000589783 983 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AL133507.1-201ENST00000605269 557 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC018638.7-201ENST00000605836 1114 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 VIS1.1-201ENST00000610517 203 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC096577.2-201ENST00000611455 153 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AL139418.1-201ENST00000613613 177 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AL357559.1-201ENST00000622228 274 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 OR5BE1P-202ENST00000641168 1176 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 MTND5P24-201ENST00000438892 1767 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 ZNF285B-201ENST00000561698 1767 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 DDX43P2-201ENST00000604753 1354 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 MIR448-201ENST00000362131 111 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 RNU6-730P-201ENST00000383954 104 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 MIR30B-201ENST00000384850 88 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AL121972.1-201ENST00000402023 252 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 MIR1911-201ENST00000410783 80 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 RPS12P5-201ENST00000423449 371 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 ELOCP18-201ENST00000434209 337 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC006011.1-201ENST00000442758 349 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 RPS20P24-201ENST00000457473 361 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 SNORD108-201ENST00000459332 71 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC090453.1-201ENST00000495560 436 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 OR5H5P-201ENST00000503164 928 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC147055.4-201ENST00000504399 745 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 MTND1P22-201ENST00000510572 951 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC010625.1-201ENST00000511296 403 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC118465.1-201ENST00000513820 1271 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC104986.1-201ENST00000517978 436 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 IGHV3-29-201ENST00000604817 344 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AL160281.1-201ENST00000605307 311 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC067852.7-201ENST00000623270 535 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AC004943.3-201ENST00000624116 600 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AL034408.1-202ENST00000636088 415 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 NOL8P1-201ENST00000508336 3529 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 AP002907.1-201ENST00000606361 1430 ntBASIC4.44□□□□□ -1.7
HERC6Q8IVU3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HERC6Q8IVU3 NUP58P1-201ENST00000502546 1738 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms