Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL139089.1-201ENST00000620372 975 ntBASIC3.86□□□□□ -1.79
LDB1Q86U70 AC097520.1-201ENST00000624435 385 ntBASIC3.86□□□□□ -1.79
LDB1Q86U70 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.86□□□□□ -1.79
LDB1Q86U70 RNA5SP196-201ENST00000625967 102 ntBASIC3.86□□□□□ -1.79
LDB1Q86U70 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.86□□□□□ -1.79
LDB1Q86U70 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDB1Q86U70 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDB1Q86U70 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB1Q86U70 AC104454.1-201ENST00000421341 1401 ntBASIC3.86□□□□□ -1.79
LDB1Q86U70 AP002907.1-201ENST00000606361 1430 ntBASIC3.86□□□□□ -1.79
LDB1Q86U70 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB1Q86U70 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB1Q86U70 AC006504.1-201ENST00000562493 3666 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.85□□□□□ -1.79
LDB1Q86U70 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB1Q86U70 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB1Q86U70 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB1Q86U70 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB1Q86U70 ATP5F1P4-201ENST00000397288 746 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 RPL31P1-201ENST00000398116 372 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 RSL24D1P4-201ENST00000400938 484 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 HMGB1P17-201ENST00000403495 628 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 USP9YP33-201ENST00000412220 421 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 USP9YP35-201ENST00000435696 412 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB1Q86U70 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB1Q86U70 AC097493.1-201ENST00000463958 372 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB1Q86U70 AC004263.1-201ENST00000479327 332 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 TMEM251P1-201ENST00000503717 318 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 AC108043.1-201ENST00000512696 574 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB1Q86U70 RNA5SP208-201ENST00000516156 78 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 DEFB131D-201ENST00000526803 184 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 AL139174.1-201ENST00000531489 886 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 AC090877.1-201ENST00000561418 344 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB1Q86U70 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB1Q86U70 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB1Q86U70 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB1Q86U70 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB1Q86U70 ZYXP1-201ENST00000617638 118 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 AC079684.1-201ENST00000621405 437 ntBASIC3.85□□□□□ -1.79
LDB1Q86U70 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB1Q86U70 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB1Q86U70 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB1Q86U70 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB1Q86U70 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 RNU6-931P-201ENST00000363850 107 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 RNU6-878P-201ENST00000384578 110 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AL121972.1-201ENST00000402023 252 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB1Q86U70 RNA5SP239-201ENST00000410218 129 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 MTCYBP38-201ENST00000417160 1123 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.84□□□□□ -1.79
LDB1Q86U70 CYP4F29P-201ENST00000420685 446 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AC092447.3-201ENST00000426027 686 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AC006548.1-201ENST00000427470 102 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AL008629.1-201ENST00000438615 184 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB1Q86U70 MTCYBP34-201ENST00000439552 670 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB1Q86U70 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 MTCO3P11-201ENST00000455103 774 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB1Q86U70 snoU13.3-201ENST00000459441 104 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB1Q86U70 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 SYPL1P1-201ENST00000473622 768 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AC090453.1-201ENST00000495560 436 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AC092045.1-201ENST00000495716 1231 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB1Q86U70 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDB1Q86U70 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB1Q86U70 AC093281.2-201ENST00000510153 597 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 Vault.1-201ENST00000516474 102 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 IGHV3-32-201ENST00000519182 355 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB1Q86U70 AC022695.1-201ENST00000522089 237 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB1Q86U70 RFPL1S-203ENST00000539579 330 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB1Q86U70 AC007224.1-201ENST00000564410 144 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AC005255.1-201ENST00000593748 216 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 AL450489.1-201ENST00000612071 468 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 uc_338.32-201ENST00000615087 172 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 AC025588.4-201ENST00000615802 908 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 CR381572.1-201ENST00000625098 102 ntBASIC3.84□□□□□ -1.79
LDB1Q86U70 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
LDB1Q86U70 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms