Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 AC092470.1-201ENST00000546187 132 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 HAUS8P1-201ENST00000549005 542 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 AC006960.3-201ENST00000561845 705 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 RPL23AP92-201ENST00000603609 255 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 EIF3FP1-201ENST00000613970 806 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 SNX18P1Y-201ENST00000616231 511 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 MIR6886-201ENST00000619864 61 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 AC004009.2-201ENST00000623016 728 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 AC011978.2-201ENST00000569835 2054 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 ERCC6-202ENST00000374127 1782 ntBASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTCHD4Q6ZW05 AC095050.2-201ENST00000510748 1458 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 C4BPAP1-201ENST00000415474 1893 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AL049780.3-201ENST00000624612 1583 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RNA5SP502-201ENST00000362694 119 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 Y_RNA.248-201ENST00000364501 109 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RNY4P34-201ENST00000364779 95 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 Y_RNA.554-201ENST00000384672 102 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 SNORD115.1-201ENST00000391109 76 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RPL17P50-201ENST00000396131 546 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RPS20P2-201ENST00000402520 389 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 SNORA11.3-201ENST00000408471 128 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RN7SKP216-201ENST00000411050 312 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 CHEK2P3-201ENST00000416118 248 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RPL31P45-201ENST00000419532 356 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC092832.1-201ENST00000422934 400 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RPL21P91-201ENST00000429231 479 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 UBE2V1P8-201ENST00000437166 265 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC073850.1-201ENST00000449243 255 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 SLC25A18P1-201ENST00000449385 454 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC010733.1-201ENST00000451515 401 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RPS20P21-201ENST00000466859 343 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RPS3AP17-201ENST00000472594 777 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RNU6-718P-201ENST00000516166 105 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 RNU6-1003P-201ENST00000517099 105 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 MTCO2P4-201ENST00000517968 247 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AP003122.4-201ENST00000530980 758 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC133555.2-201ENST00000550213 292 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC007424.1-203ENST00000554613 687 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 ZNF519P2-201ENST00000557032 169 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AL157394.1-201ENST00000562983 1224 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 MTND6P33-201ENST00000571794 183 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC022726.1-201ENST00000587475 207 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 VN1R79P-201ENST00000593540 513 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AL606834.2-201ENST00000602954 668 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AL121612.2-201ENST00000612261 482 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 MIR6729-201ENST00000618194 65 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 SNORA11.6-201ENST00000619030 128 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 AC110994.2-201ENST00000635481 492 ntBASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTCHD4Q6ZW05 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 RNU6-28P-201ENST00000362378 107 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 RNU6-853P-201ENST00000364306 107 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 RNU6-1283P-201ENST00000365314 105 ntBASIC4.23□□□□□ -1.73
PTCHD4Q6ZW05 SNORD82-201ENST00000365530 70 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms