Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL157392.4-201ENST00000609756 345 ntBASIC3.58□□□□□ -1.84
RFWD3Q6PCD5 AC105429.2-201ENST00000610567 517 ntBASIC3.58□□□□□ -1.84
RFWD3Q6PCD5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.58□□□□□ -1.84
RFWD3Q6PCD5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.58□□□□□ -1.84
RFWD3Q6PCD5 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.58□□□□□ -1.84
RFWD3Q6PCD5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.58□□□□□ -1.84
RFWD3Q6PCD5 AC058791.1-201ENST00000608412 3198 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AP000568.1-201ENST00000282964 442 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 RNU6-224P-201ENST00000384055 107 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 MTCO2P31-201ENST00000402702 684 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC004022.2-201ENST00000413824 193 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AL009048.1-201ENST00000450437 298 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC006539.3-201ENST00000454258 129 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 NAP1L1P3-201ENST00000462291 880 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AP000893.1-201ENST00000474462 794 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 RPL21P131-201ENST00000497298 483 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 SETP14-201ENST00000497538 873 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC021146.5-201ENST00000503544 545 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 HSPD1P15-201ENST00000505573 1122 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC113420.1-201ENST00000507903 571 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 RNU2-27P-201ENST00000516185 142 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 IGKV2-26-201ENST00000518305 343 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AP006245.1-201ENST00000522549 120 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 MTCO3P15-201ENST00000526563 574 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 DUXAP6-201ENST00000553858 601 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 BPTFP1-201ENST00000579209 492 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 MTCO2P2-201ENST00000591258 225 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 SGO1P1-201ENST00000603525 1447 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 MIR8058-201ENST00000615737 89 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC123767.1-202ENST00000620407 817 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC068787.1-201ENST00000623908 691 ntBASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFWD3Q6PCD5 AC068647.1-201ENST00000489539 2265 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC004972.1-201ENST00000623934 2209 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC000367.1-201ENST00000452711 1766 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 NMD3P1-201ENST00000439704 1488 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 RNU4-51P-201ENST00000364206 140 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 RNU1-33P-201ENST00000364249 162 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 MIR16-1-201ENST00000385271 89 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 MTATP6P20-201ENST00000414147 562 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC007390.1-201ENST00000415722 356 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 RPS7P15-201ENST00000415804 584 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 C1DP1-201ENST00000426049 402 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 USP9YP31-201ENST00000431405 881 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 OR10R1P-201ENST00000441524 1141 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 HMGN2P21-201ENST00000447764 270 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AL049830.2-201ENST00000480072 201 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 RPS4XP22-201ENST00000480755 780 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 RPS27P23-201ENST00000487608 251 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AP000563.1-201ENST00000490865 758 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 WBP1LP4-201ENST00000505043 344 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC118282.2-201ENST00000508739 374 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC023141.12-201ENST00000512399 199 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.56□□□□□ -1.84
RFWD3Q6PCD5 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms