Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 USP9YP34-201ENST00000453983 808 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT40Q6A162 AC005229.2-201ENST00000456995 399 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 RPS15AP1-201ENST00000457423 391 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AC146507.1-201ENST00000468335 354 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 LARP1BP2-201ENST00000486594 519 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT40Q6A162 RNA5SP143-201ENST00000516936 115 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
KRT40Q6A162 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT40Q6A162 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.07□□□□□ -1.6
KRT40Q6A162 MIR3158-1-201ENST00000583596 81 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AC233280.2-201ENST00000603917 1070 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AC092954.2-201ENST00000609103 430 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 AC138649.3-201ENST00000622154 254 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT40Q6A162 AC073544.1-201ENST00000600110 1595 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRT40Q6A162 LINC00561-201ENST00000565815 2738 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRT40Q6A162 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT40Q6A162 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.07□□□□□ -1.6
KRT40Q6A162 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.07□□□□□ -1.6
KRT40Q6A162 OR4G11P-202ENST00000642116 1414 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT40Q6A162 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRT40Q6A162 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
KRT40Q6A162 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC067945.1-201ENST00000342609 618 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 RNU1-94P-201ENST00000362627 173 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT40Q6A162 VN1R8P-201ENST00000407739 893 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 MIR1911-201ENST00000410783 80 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 CCDC58P2-201ENST00000417131 366 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 USP9YP13-201ENST00000417797 480 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 PDSS1P1-201ENST00000422953 1114 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 GLRXP1-201ENST00000423261 334 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT40Q6A162 MTCO3P21-201ENST00000430791 643 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AL031663.1-201ENST00000437445 219 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AL450263.2-201ENST00000439400 589 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRT40Q6A162 PDSS1P2-201ENST00000449397 678 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT40Q6A162 RN7SL542P-201ENST00000467147 294 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 RN7SL303P-201ENST00000469773 251 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT40Q6A162 ARL2BPP6-201ENST00000512757 439 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 MIR2116-201ENST00000517221 80 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC008694.2-201ENST00000517591 306 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT40Q6A162 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT40Q6A162 OR6C73P-201ENST00000546432 358 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.06□□□□□ -1.6
KRT40Q6A162 AC008687.2-201ENST00000597865 520 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC079587.1-201ENST00000603846 277 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC090948.1-201ENST00000607464 549 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AL359535.1-201ENST00000612100 1087 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 SNX18P1Y-201ENST00000616231 511 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC092794.2-201ENST00000620933 563 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 AC067931.1-201ENST00000624190 671 ntBASIC5.06□□□□□ -1.6
KRT40Q6A162 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
KRT40Q6A162 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.06□□□□□ -1.6
KRT40Q6A162 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT40Q6A162 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRT40Q6A162 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT40Q6A162 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRT40Q6A162 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT40Q6A162 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.06□□□□□ -1.6
KRT40Q6A162 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.05□□□□□ -1.6
KRT40Q6A162 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT40Q6A162 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
KRT40Q6A162 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AC105074.1-201ENST00000623380 3095 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT40Q6A162 RNU6-761P-201ENST00000384148 107 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 RNU1-13P-201ENST00000384499 162 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 AC097374.1-203ENST00000400783 485 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 RPS3AP24-201ENST00000407896 734 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 RNA5SP317-201ENST00000410176 116 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 RNA5SP311-201ENST00000411290 116 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT40Q6A162 AC009237.5-201ENST00000414271 501 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 AC048351.1-201ENST00000420064 602 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms