Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF43Q68DV7 AL034549.2-201ENST00000618285 3373 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF43Q68DV7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 MIR133B-201ENST00000362210 119 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 RNY1P12-201ENST00000364251 105 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 MIR514A2-201ENST00000385131 88 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 MIR514A3-201ENST00000385132 88 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC078974.1-201ENST00000411597 223 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 RPL31P12-201ENST00000422587 358 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 SRSF1P1-201ENST00000424058 520 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC119618.1-201ENST00000434191 222 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 TXNP1-201ENST00000441872 371 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 AL035666.1-201ENST00000446195 348 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC105399.1-202ENST00000447303 205 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC104058.1-201ENST00000448028 297 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC006512.1-201ENST00000468816 291 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC093267.1-201ENST00000489176 961 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC091885.1-201ENST00000506658 268 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 RN7SKP40-201ENST00000517211 242 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 NCAPGP2-201ENST00000557911 754 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 OR1F2P-201ENST00000570470 933 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 MIR5186-201ENST00000577504 120 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC090312.1-201ENST00000580637 348 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC098848.2-201ENST00000588023 330 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC121334.2-201ENST00000605387 271 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AC126915.2-201ENST00000610957 190 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AL157817.1-201ENST00000614264 790 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF43Q68DV7 ZNF652P1-201ENST00000442420 1309 ntBASIC5.64□□□□□ -1.51
RNF43Q68DV7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF43Q68DV7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF43Q68DV7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC116158.1-201ENST00000560231 2129 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF43Q68DV7 MTND5P27-201ENST00000428871 1720 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 MTND5P19-201ENST00000424872 1794 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF43Q68DV7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 U3.2-201ENST00000362981 210 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 RNU6-251P-201ENST00000363235 104 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 Y_RNA.307-201ENST00000365022 117 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF43Q68DV7 RNU6-952P-201ENST00000391164 108 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 RNA5SP241-201ENST00000391326 114 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 MIR548K-201ENST00000408406 116 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 AL669831.1-202ENST00000428504 417 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC107399.1-201ENST00000451226 265 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 RPL30P15-201ENST00000457129 321 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 RPL7P6-201ENST00000480903 738 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AL049874.2-201ENST00000492636 288 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC023424.1-201ENST00000496058 459 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 MTCYBP40-201ENST00000509390 1135 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 RN7SKP99-201ENST00000517028 307 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC009812.2-201ENST00000517657 457 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 RN7SL290P-201ENST00000578661 300 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 FAM157A-202ENST00000615155 405 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AL138820.1-201ENST00000617901 5305 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF43Q68DV7 AC104964.3-201ENST00000606115 2860 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF43Q68DV7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF43Q68DV7 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.63□□□□□ -1.51
RNF43Q68DV7 ZNF807-201ENST00000328088 1707 ntBASIC5.62□□□□□ -1.51
RNF43Q68DV7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF43Q68DV7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RNF43Q68DV7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms