Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SCN1BQ07699 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 MIR135A2-201ENST00000384854 100 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 RNU6-882P-201ENST00000391025 103 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AL591034.1-201ENST00000407447 340 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 RNU6-584P-201ENST00000410350 95 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 MFSD13B-201ENST00000420133 1290 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 HMGB3P5-201ENST00000428894 612 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 RPS25P9-201ENST00000435591 252 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 SKP1P1-201ENST00000438081 489 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 RAC1P7-201ENST00000445367 377 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 ARPC3P5-201ENST00000448802 534 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 AC108729.1-201ENST00000487812 947 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 RPS23P1-201ENST00000491662 432 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 AC093278.1-201ENST00000494700 600 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 CBX3P3-201ENST00000508108 532 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 DEFB131D-201ENST00000526803 184 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.58□□□□□ -1.84
SCN1BQ07699 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN1BQ07699 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 TVP23BP1-201ENST00000557500 617 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 CYCSP2-201ENST00000558168 301 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 MED28P6-201ENST00000558776 231 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 AC090695.1-201ENST00000561269 1222 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AC009712.1-201ENST00000564938 316 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN1BQ07699 AC080013.3-201ENST00000606839 578 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AC090948.1-201ENST00000607464 549 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AC245297.2-201ENST00000610119 565 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AC106028.5-201ENST00000610332 395 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AL390240.1-201ENST00000612950 384 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AL596245.1-201ENST00000618994 362 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AC013470.4-201ENST00000619978 986 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 AC090897.3-201ENST00000636973 1157 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 CEP170P1-201ENST00000502249 4587 ntBASIC3.58□□□□□ -1.84
SCN1BQ07699 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.58□□□□□ -1.84
SCN1BQ07699 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SCN1BQ07699 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN1BQ07699 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN1BQ07699 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN1BQ07699 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN1BQ07699 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN1BQ07699 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SCN1BQ07699 RNU6-398P-201ENST00000384143 109 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 MIR129-1-201ENST00000384972 72 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SCN1BQ07699 RNU6-952P-201ENST00000391164 108 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN1BQ07699 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN1BQ07699 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SCN1BQ07699 RNU4-65P-201ENST00000410473 140 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.57□□□□□ -1.84
SCN1BQ07699 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.57□□□□□ -1.84
SCN1BQ07699 NEK4P1-201ENST00000433383 879 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AC004866.2-201ENST00000438285 481 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AL513533.1-201ENST00000453728 415 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.57□□□□□ -1.84
SCN1BQ07699 RPL23AP81-201ENST00000455252 467 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 BX322784.1-201ENST00000455793 1077 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN1BQ07699 snoU13.1-201ENST00000459157 104 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN1BQ07699 RN7SL98P-201ENST00000462271 300 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN1BQ07699 RN7SL271P-201ENST00000487601 295 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC013356.1-201ENST00000489027 564 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 RN7SL810P-201ENST00000493031 276 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.57□□□□□ -1.84
SCN1BQ07699 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN1BQ07699 MTND1P6-201ENST00000523621 946 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN1BQ07699 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.57□□□□□ -1.84
SCN1BQ07699 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms