Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RNU6-468P-201ENST00000384003 109 ntBASIC3.42□□□□□ -1.86
CBX1P83916 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CBX1P83916 AP000567.1-201ENST00000406413 156 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AL023807.1-201ENST00000407932 359 ntBASIC3.42□□□□□ -1.86
CBX1P83916 RNU6-628P-201ENST00000410675 107 ntBASIC3.42□□□□□ -1.86
CBX1P83916 FNDC3CP-201ENST00000420795 1155 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AC245054.1-201ENST00000420944 258 ntBASIC3.42□□□□□ -1.86
CBX1P83916 RPS6P14-201ENST00000425165 719 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AL035410.1-201ENST00000427409 427 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AC006548.1-201ENST00000427470 102 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.42□□□□□ -1.86
CBX1P83916 FO393414.1-201ENST00000428697 1184 ntBASIC3.42□□□□□ -1.86
CBX1P83916 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CBX1P83916 RPS7P2-201ENST00000435134 607 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.42□□□□□ -1.86
CBX1P83916 AL592437.1-201ENST00000443781 492 ntBASIC3.42□□□□□ -1.86
CBX1P83916 SEPT14P24-201ENST00000447236 180 ntBASIC3.42□□□□□ -1.86
CBX1P83916 Z99127.3-201ENST00000448158 395 ntBASIC3.42□□□□□ -1.86
CBX1P83916 RPL7P52-201ENST00000449200 742 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.42□□□□□ -1.86
CBX1P83916 GSTA11P-201ENST00000452866 669 ntBASIC3.42□□□□□ -1.86
CBX1P83916 MTCO3P35-201ENST00000485582 781 ntBASIC3.42□□□□□ -1.86
CBX1P83916 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.42□□□□□ -1.86
CBX1P83916 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 SNORA31.20-201ENST00000517111 133 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.42□□□□□ -1.86
CBX1P83916 AC034205.1-201ENST00000520621 638 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AP000790.1-201ENST00000528891 737 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.42□□□□□ -1.86
CBX1P83916 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.42□□□□□ -1.86
CBX1P83916 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.42□□□□□ -1.86
CBX1P83916 MIR5096-201ENST00000583713 70 ntBASIC3.42□□□□□ -1.86
CBX1P83916 SNORD39.3-201ENST00000584451 71 ntBASIC3.42□□□□□ -1.86
CBX1P83916 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.42□□□□□ -1.86
CBX1P83916 AC006557.5-201ENST00000603126 811 ntBASIC3.42□□□□□ -1.86
CBX1P83916 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.42□□□□□ -1.86
CBX1P83916 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.42□□□□□ -1.86
CBX1P83916 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 AC073968.1-201ENST00000618594 637 ntBASIC3.42□□□□□ -1.86
CBX1P83916 MIR6758-201ENST00000620653 63 ntBASIC3.42□□□□□ -1.86
CBX1P83916 CR381572.1-201ENST00000625098 102 ntBASIC3.42□□□□□ -1.86
CBX1P83916 MIR6830-201ENST00000636015 70 ntBASIC3.42□□□□□ -1.86
CBX1P83916 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CBX1P83916 ASNSP3-201ENST00000451989 1306 ntBASIC3.42□□□□□ -1.86
CBX1P83916 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
CBX1P83916 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CBX1P83916 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CBX1P83916 RNA5SP295-201ENST00000362655 121 ntBASIC3.41□□□□□ -1.86
CBX1P83916 RNA5SP258-201ENST00000362750 119 ntBASIC3.41□□□□□ -1.86
CBX1P83916 RNA5SP130-201ENST00000364431 114 ntBASIC3.41□□□□□ -1.86
CBX1P83916 MTND4LP20-201ENST00000402379 270 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AL139098.1-201ENST00000407291 389 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.41□□□□□ -1.86
CBX1P83916 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.41□□□□□ -1.86
CBX1P83916 SFR1P2-201ENST00000421841 730 ntBASIC3.41□□□□□ -1.86
CBX1P83916 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.41□□□□□ -1.86
CBX1P83916 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CBX1P83916 AC016712.1-201ENST00000431088 378 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AL590103.1-201ENST00000434488 307 ntBASIC3.41□□□□□ -1.86
CBX1P83916 OR4C10P-201ENST00000434991 931 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.41□□□□□ -1.86
CBX1P83916 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.41□□□□□ -1.86
CBX1P83916 CYCSP53-201ENST00000455540 265 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.41□□□□□ -1.86
CBX1P83916 TRBV26-201ENST00000456572 344 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AC023598.1-201ENST00000472521 361 ntBASIC3.41□□□□□ -1.86
CBX1P83916 RPS26P21-201ENST00000475397 348 ntBASIC3.41□□□□□ -1.86
CBX1P83916 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.41□□□□□ -1.86
CBX1P83916 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.41□□□□□ -1.86
CBX1P83916 MTND4LP22-201ENST00000508209 276 ntBASIC3.41□□□□□ -1.86
CBX1P83916 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.41□□□□□ -1.86
CBX1P83916 MRPL49P2-201ENST00000521066 465 ntBASIC3.41□□□□□ -1.86
CBX1P83916 C1GALT1P3-201ENST00000522049 819 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CBX1P83916 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.41□□□□□ -1.86
CBX1P83916 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.41□□□□□ -1.86
CBX1P83916 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CBX1P83916 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.41□□□□□ -1.86
CBX1P83916 AC015726.1-201ENST00000602353 681 ntBASIC3.41□□□□□ -1.86
CBX1P83916 GAS5-AS1-201ENST00000602767 694 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AP000787.2-201ENST00000604432 568 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AL445423.1-201ENST00000609941 536 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.41□□□□□ -1.86
CBX1P83916 VN1R74P-201ENST00000613259 503 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AC090506.2-201ENST00000624521 419 ntBASIC3.41□□□□□ -1.86
CBX1P83916 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.41□□□□□ -1.86
CBX1P83916 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CBX1P83916 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CBX1P83916 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.41□□□□□ -1.86
CBX1P83916 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.41□□□□□ -1.86
CBX1P83916 FAM35BP-202ENST00000497389 3337 ntBASIC3.41□□□□□ -1.86
CBX1P83916 AC009487.2-201ENST00000420969 6821 ntBASIC3.4□□□□□ -1.86
CBX1P83916 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.4□□□□□ -1.86
CBX1P83916 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms