Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 KLHL2P1-201ENST00000508691 521 ntBASIC5.05□□□□□ -1.6
YBX1P67809 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.05□□□□□ -1.6
YBX1P67809 RPS27AP18-201ENST00000515536 459 ntBASIC5.05□□□□□ -1.6
YBX1P67809 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.05□□□□□ -1.6
YBX1P67809 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.05□□□□□ -1.6
YBX1P67809 AC090572.1-201ENST00000519251 160 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.05□□□□□ -1.6
YBX1P67809 AC107934.1-201ENST00000522215 217 ntBASIC5.05□□□□□ -1.6
YBX1P67809 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.05□□□□□ -1.6
YBX1P67809 HAUS8P1-201ENST00000549005 542 ntBASIC5.05□□□□□ -1.6
YBX1P67809 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.05□□□□□ -1.6
YBX1P67809 LARP7P2-201ENST00000575306 125 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC100830.2-201ENST00000581636 240 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.05□□□□□ -1.6
YBX1P67809 AP001330.4-201ENST00000604350 154 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC009597.2-201ENST00000604659 592 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC024940.4-201ENST00000605507 246 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.05□□□□□ -1.6
YBX1P67809 AC090425.1-201ENST00000610007 140 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC126915.2-201ENST00000610957 190 ntBASIC5.05□□□□□ -1.6
YBX1P67809 CR381572.1-201ENST00000625098 102 ntBASIC5.05□□□□□ -1.6
YBX1P67809 OR2L1P-202ENST00000641567 1023 ntBASIC5.05□□□□□ -1.6
YBX1P67809 MTCO1P12-201ENST00000414273 1543 ntBASIC5.05□□□□□ -1.6
YBX1P67809 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
YBX1P67809 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 AC012618.3-205ENST00000637896 1496 ntBASIC5.05□□□□□ -1.6
YBX1P67809 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
YBX1P67809 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.05□□□□□ -1.6
YBX1P67809 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 CASC19-204ENST00000641001 2055 ntBASIC5.04□□□□□ -1.6
YBX1P67809 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
YBX1P67809 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
YBX1P67809 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
YBX1P67809 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
YBX1P67809 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
YBX1P67809 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
YBX1P67809 Y_RNA.133-201ENST00000363428 110 ntBASIC5.04□□□□□ -1.6
YBX1P67809 RNA5SP90-201ENST00000364801 99 ntBASIC5.04□□□□□ -1.6
YBX1P67809 RNU6-996P-201ENST00000365438 107 ntBASIC5.04□□□□□ -1.6
YBX1P67809 RNU6-196P-201ENST00000384315 107 ntBASIC5.04□□□□□ -1.6
YBX1P67809 RNU6-831P-201ENST00000384548 107 ntBASIC5.04□□□□□ -1.6
YBX1P67809 MIR589-201ENST00000385238 99 ntBASIC5.04□□□□□ -1.6
YBX1P67809 AL356057.3-201ENST00000402607 340 ntBASIC5.04□□□□□ -1.6
YBX1P67809 RPL21P67-201ENST00000402896 478 ntBASIC5.04□□□□□ -1.6
YBX1P67809 RPL31P52-201ENST00000407532 367 ntBASIC5.04□□□□□ -1.6
YBX1P67809 AC093655.2-201ENST00000425735 631 ntBASIC5.04□□□□□ -1.6
YBX1P67809 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.04□□□□□ -1.6
YBX1P67809 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.04□□□□□ -1.6
YBX1P67809 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.04□□□□□ -1.6
YBX1P67809 AC012512.1-201ENST00000446594 718 ntBASIC5.04□□□□□ -1.6
YBX1P67809 AP000797.2-201ENST00000475768 606 ntBASIC5.04□□□□□ -1.6
YBX1P67809 RN7SL30P-201ENST00000488416 306 ntBASIC5.04□□□□□ -1.6
YBX1P67809 AC090453.1-201ENST00000495560 436 ntBASIC5.04□□□□□ -1.6
YBX1P67809 AC005741.1-201ENST00000511094 432 ntBASIC5.04□□□□□ -1.6
YBX1P67809 TTC39CP1-201ENST00000512513 755 ntBASIC5.04□□□□□ -1.6
YBX1P67809 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.04□□□□□ -1.6
YBX1P67809 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.04□□□□□ -1.6
YBX1P67809 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.04□□□□□ -1.6
YBX1P67809 AP003072.2-201ENST00000527756 676 ntBASIC5.04□□□□□ -1.6
YBX1P67809 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.04□□□□□ -1.6
YBX1P67809 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.04□□□□□ -1.6
YBX1P67809 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.04□□□□□ -1.6
YBX1P67809 AL080274.1-201ENST00000605565 220 ntBASIC5.04□□□□□ -1.6
YBX1P67809 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.04□□□□□ -1.6
YBX1P67809 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.04□□□□□ -1.6
YBX1P67809 AC074101.1-201ENST00000637861 241 ntBASIC5.04□□□□□ -1.6
YBX1P67809 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
YBX1P67809 KPNA2P2-201ENST00000419546 1489 ntBASIC5.04□□□□□ -1.6
YBX1P67809 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
YBX1P67809 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
YBX1P67809 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
YBX1P67809 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
YBX1P67809 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
YBX1P67809 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
YBX1P67809 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
YBX1P67809 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
YBX1P67809 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.03□□□□□ -1.6
YBX1P67809 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
YBX1P67809 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
YBX1P67809 RNU1-85P-201ENST00000364127 164 ntBASIC5.03□□□□□ -1.6
YBX1P67809 RNU6-343P-201ENST00000364709 104 ntBASIC5.03□□□□□ -1.6
YBX1P67809 RNU6-1105P-201ENST00000384774 107 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AL645927.1-201ENST00000396783 406 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AL583835.1-201ENST00000399570 407 ntBASIC5.03□□□□□ -1.6
YBX1P67809 EIF5P1-201ENST00000400019 1231 ntBASIC5.03□□□□□ -1.6
YBX1P67809 RN7SKP125-201ENST00000410481 302 ntBASIC5.03□□□□□ -1.6
YBX1P67809 RNU2-39P-201ENST00000410604 198 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AC127526.1-201ENST00000417526 366 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.03□□□□□ -1.6
YBX1P67809 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.03□□□□□ -1.6
YBX1P67809 AC079781.2-201ENST00000446424 169 ntBASIC5.03□□□□□ -1.6
YBX1P67809 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.03□□□□□ -1.6
YBX1P67809 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.03□□□□□ -1.6
YBX1P67809 Z92846.1-201ENST00000456203 268 ntBASIC5.03□□□□□ -1.6
YBX1P67809 MTCO2P29-201ENST00000465212 189 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms