Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC025281.1-201ENST00000567026 265 ntBASIC1.61□□□□□ -2.15
RPL39P62891 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.61□□□□□ -2.15
RPL39P62891 YWHAQP7-201ENST00000603536 658 ntBASIC1.61□□□□□ -2.15
RPL39P62891 ATP1B3P1-201ENST00000605365 821 ntBASIC1.61□□□□□ -2.15
RPL39P62891 BX323046.1-201ENST00000610145 535 ntBASIC1.61□□□□□ -2.15
RPL39P62891 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.61□□□□□ -2.15
RPL39P62891 AC092159.4-201ENST00000624944 550 ntBASIC1.61□□□□□ -2.15
RPL39P62891 AL137790.1-201ENST00000634283 177 ntBASIC1.61□□□□□ -2.15
RPL39P62891 OR8B1P-202ENST00000641132 1178 ntBASIC1.61□□□□□ -2.15
RPL39P62891 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.61□□□□□ -2.15
RPL39P62891 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RPL39P62891 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RPL39P62891 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
RPL39P62891 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RPL39P62891 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.6□□□□□ -2.15
RPL39P62891 MIR34A-201ENST00000385130 110 ntBASIC1.6□□□□□ -2.15
RPL39P62891 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RPL39P62891 AC240504.1-201ENST00000395709 845 ntBASIC1.6□□□□□ -2.15
RPL39P62891 ANAPC10P1-201ENST00000395991 556 ntBASIC1.6□□□□□ -2.15
RPL39P62891 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.6□□□□□ -2.15
RPL39P62891 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.6□□□□□ -2.15
RPL39P62891 MTCO1P39-201ENST00000426148 480 ntBASIC1.6□□□□□ -2.15
RPL39P62891 NIPA2P1-201ENST00000426223 976 ntBASIC1.6□□□□□ -2.15
RPL39P62891 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL39P62891 RPL12P46-201ENST00000436610 195 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AC000041.1-201ENST00000439655 175 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.6□□□□□ -2.15
RPL39P62891 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL39P62891 RPS15AP1-201ENST00000457423 391 ntBASIC1.6□□□□□ -2.15
RPL39P62891 S100A11P2-201ENST00000467589 312 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AP000852.1-201ENST00000472460 573 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AC017015.1-201ENST00000477387 286 ntBASIC1.6□□□□□ -2.15
RPL39P62891 RPL21P131-201ENST00000497298 483 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AC006445.2-201ENST00000510061 472 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL39P62891 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.6□□□□□ -2.15
RPL39P62891 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.6□□□□□ -2.15
RPL39P62891 SNORA31.1-201ENST00000515993 133 ntBASIC1.6□□□□□ -2.15
RPL39P62891 SNORA31.5-201ENST00000516190 133 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL39P62891 AC104115.2-201ENST00000523026 687 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AC021269.2-201ENST00000532318 330 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AC103810.1-201ENST00000579873 453 ntBASIC1.6□□□□□ -2.15
RPL39P62891 MIR4444-1-201ENST00000581696 74 ntBASIC1.6□□□□□ -2.15
RPL39P62891 MIR4444-2-201ENST00000584390 74 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AP001029.3-201ENST00000588063 596 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL39P62891 AC034102.8-201ENST00000615146 484 ntBASIC1.6□□□□□ -2.15
RPL39P62891 MIR6766-201ENST00000622641 72 ntBASIC1.6□□□□□ -2.15
RPL39P62891 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RPL39P62891 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.6□□□□□ -2.15
RPL39P62891 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.6□□□□□ -2.15
RPL39P62891 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.6□□□□□ -2.15
RPL39P62891 HSP90AA4P-202ENST00000506915 2228 ntBASIC1.6□□□□□ -2.15
RPL39P62891 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
RPL39P62891 AC007336.1-201ENST00000576365 3828 ntBASIC1.59□□□□□ -2.15
RPL39P62891 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RPL39P62891 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RPL39P62891 AC002546.1-201ENST00000588041 2504 ntBASIC1.59□□□□□ -2.15
RPL39P62891 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RPL39P62891 RNA5SP393-201ENST00000363423 117 ntBASIC1.59□□□□□ -2.15
RPL39P62891 AL591416.1-201ENST00000404015 867 ntBASIC1.59□□□□□ -2.15
RPL39P62891 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.59□□□□□ -2.15
RPL39P62891 ATG3P1-201ENST00000419507 911 ntBASIC1.59□□□□□ -2.15
RPL39P62891 AC092832.1-201ENST00000422934 400 ntBASIC1.59□□□□□ -2.15
RPL39P62891 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.59□□□□□ -2.15
RPL39P62891 AC091390.3-201ENST00000426478 338 ntBASIC1.59□□□□□ -2.15
RPL39P62891 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.59□□□□□ -2.15
RPL39P62891 AC006994.1-201ENST00000438212 839 ntBASIC1.59□□□□□ -2.15
RPL39P62891 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.59□□□□□ -2.15
RPL39P62891 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.59□□□□□ -2.15
RPL39P62891 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.59□□□□□ -2.15
RPL39P62891 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.59□□□□□ -2.15
RPL39P62891 MTCYBP37-201ENST00000510642 1133 ntBASIC1.59□□□□□ -2.15
RPL39P62891 ACTR6P1-201ENST00000514311 1104 ntBASIC1.59□□□□□ -2.15
RPL39P62891 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.59□□□□□ -2.15
RPL39P62891 AC113192.3-201ENST00000529152 742 ntBASIC1.59□□□□□ -2.15
RPL39P62891 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.59□□□□□ -2.15
RPL39P62891 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.59□□□□□ -2.15
RPL39P62891 AL163153.1-201ENST00000554223 283 ntBASIC1.59□□□□□ -2.15
RPL39P62891 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.59□□□□□ -2.15
RPL39P62891 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.59□□□□□ -2.15
RPL39P62891 MIR4429-201ENST00000580105 73 ntBASIC1.59□□□□□ -2.15
RPL39P62891 MIR6075-201ENST00000620782 95 ntBASIC1.59□□□□□ -2.15
RPL39P62891 AC007342.8-201ENST00000623278 678 ntBASIC1.59□□□□□ -2.15
RPL39P62891 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.59□□□□□ -2.15
RPL39P62891 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
RPL39P62891 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
RPL39P62891 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.16
RPL39P62891 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.58□□□□□ -2.16
RPL39P62891 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.58□□□□□ -2.16
RPL39P62891 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RPL39P62891 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RPL39P62891 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.58□□□□□ -2.16
RPL39P62891 RN7SKP140-201ENST00000411196 284 ntBASIC1.58□□□□□ -2.16
RPL39P62891 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.58□□□□□ -2.16
RPL39P62891 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.58□□□□□ -2.16
RPL39P62891 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.58□□□□□ -2.16
RPL39P62891 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms