Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.33□□□□□ -1.88
LMO4P61968 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 Y_RNA.6-201ENST00000362350 114 ntBASIC3.33□□□□□ -1.88
LMO4P61968 Y_RNA.41-201ENST00000362646 102 ntBASIC3.33□□□□□ -1.88
LMO4P61968 SNORD35B-201ENST00000363660 87 ntBASIC3.33□□□□□ -1.88
LMO4P61968 Y_RNA.408-201ENST00000383987 102 ntBASIC3.33□□□□□ -1.88
LMO4P61968 SNORD65.1-201ENST00000390889 71 ntBASIC3.33□□□□□ -1.88
LMO4P61968 DSTNP4-201ENST00000399472 474 ntBASIC3.33□□□□□ -1.88
LMO4P61968 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.33□□□□□ -1.88
LMO4P61968 TPMTP3-201ENST00000411928 735 ntBASIC3.33□□□□□ -1.88
LMO4P61968 FCF1P9-201ENST00000412546 282 ntBASIC3.33□□□□□ -1.88
LMO4P61968 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO4P61968 RWDD4P2-201ENST00000426392 563 ntBASIC3.33□□□□□ -1.88
LMO4P61968 MED14P1-201ENST00000430517 648 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AL513175.1-201ENST00000431492 780 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.33□□□□□ -1.88
LMO4P61968 YWHAZP8-201ENST00000436935 731 ntBASIC3.33□□□□□ -1.88
LMO4P61968 MTATP6P23-201ENST00000440153 476 ntBASIC3.33□□□□□ -1.88
LMO4P61968 COX6CP2-201ENST00000444980 225 ntBASIC3.33□□□□□ -1.88
LMO4P61968 MTCO2P25-201ENST00000447065 681 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO4P61968 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 OR9M1P-201ENST00000459641 921 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO4P61968 GAPDHP39-201ENST00000481866 979 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 SOD1P3-201ENST00000518682 454 ntBASIC3.33□□□□□ -1.88
LMO4P61968 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.33□□□□□ -1.88
LMO4P61968 OR4C2P-201ENST00000530855 1064 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AC005832.3-201ENST00000537929 631 ntBASIC3.33□□□□□ -1.88
LMO4P61968 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
LMO4P61968 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO4P61968 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 AC012414.6-201ENST00000568241 401 ntBASIC3.33□□□□□ -1.88
LMO4P61968 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.33□□□□□ -1.88
LMO4P61968 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.33□□□□□ -1.88
LMO4P61968 AC009220.3-201ENST00000604318 586 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AC128687.1-201ENST00000605304 619 ntBASIC3.33□□□□□ -1.88
LMO4P61968 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.33□□□□□ -1.88
LMO4P61968 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
LMO4P61968 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.33□□□□□ -1.88
LMO4P61968 U6atac.1-201ENST00000616025 117 ntBASIC3.33□□□□□ -1.88
LMO4P61968 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO4P61968 FAM157B-203ENST00000639350 358 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AL596275.2-204ENST00000641628 552 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AL596275.2-206ENST00000641957 626 ntBASIC3.33□□□□□ -1.88
LMO4P61968 AC109315.1-201ENST00000584143 1347 ntBASIC3.33□□□□□ -1.88
LMO4P61968 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO4P61968 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO4P61968 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.33□□□□□ -1.88
LMO4P61968 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 AL136964.1-201ENST00000622038 2990 ntBASIC3.33□□□□□ -1.88
LMO4P61968 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMO4P61968 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LMO4P61968 AC000123.3-201ENST00000624029 4975 ntBASIC3.32□□□□□ -1.88
LMO4P61968 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LMO4P61968 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LMO4P61968 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LMO4P61968 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
LMO4P61968 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LMO4P61968 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LMO4P61968 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LMO4P61968 AP001273.1-201ENST00000624493 3152 ntBASIC3.32□□□□□ -1.88
LMO4P61968 SNORA62.3-201ENST00000365110 153 ntBASIC3.32□□□□□ -1.88
LMO4P61968 U3.15-201ENST00000365398 212 ntBASIC3.32□□□□□ -1.88
LMO4P61968 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LMO4P61968 RNU6-253P-201ENST00000384730 105 ntBASIC3.32□□□□□ -1.88
LMO4P61968 PTMAP2-201ENST00000397627 327 ntBASIC3.32□□□□□ -1.88
LMO4P61968 RNU6ATAC-201ENST00000408749 126 ntBASIC3.32□□□□□ -1.88
LMO4P61968 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 CDK8P2-201ENST00000415020 547 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.32□□□□□ -1.88
LMO4P61968 MRPS36P1-201ENST00000421291 307 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.32□□□□□ -1.88
LMO4P61968 USP9YP22-201ENST00000438971 294 ntBASIC3.32□□□□□ -1.88
LMO4P61968 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 ZNF114P1-201ENST00000453500 292 ntBASIC3.32□□□□□ -1.88
LMO4P61968 RFC5P1-201ENST00000454419 874 ntBASIC3.32□□□□□ -1.88
LMO4P61968 SUMO2P2-201ENST00000456482 255 ntBASIC3.32□□□□□ -1.88
LMO4P61968 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.32□□□□□ -1.88
LMO4P61968 TPT1P7-201ENST00000458300 517 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms