Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL365503.1-201ENST00000605247 905 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 RNU6-88P-201ENST00000606801 100 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 AL136981.2-201ENST00000617319 734 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 AL356585.4-201ENST00000623078 1229 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
RHBDL3P58872 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDL3P58872 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDL3P58872 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDL3P58872 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.84□□□□□ -1.64
RHBDL3P58872 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
RHBDL3P58872 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RHBDL3P58872 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
RHBDL3P58872 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.83□□□□□ -1.64
RHBDL3P58872 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RHBDL3P58872 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDL3P58872 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 RNU6-600P-201ENST00000362524 99 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 RNU6-629P-201ENST00000384061 103 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 AL356131.1-201ENST00000405826 414 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 RNU2-37P-201ENST00000410695 177 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 BMS1P19-201ENST00000433925 393 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDL3P58872 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDL3P58872 AC104563.1-201ENST00000476147 376 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 AC093278.1-201ENST00000494700 600 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 HMGB1P22-201ENST00000505315 124 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.83□□□□□ -1.64
RHBDL3P58872 NDUFB4P9-201ENST00000511646 388 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.83□□□□□ -1.64
RHBDL3P58872 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.83□□□□□ -1.64
RHBDL3P58872 AC126177.3-201ENST00000551839 688 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDL3P58872 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDL3P58872 RPL23AP87-202ENST00000573039 466 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 MIR5685-201ENST00000579080 79 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.83□□□□□ -1.64
RHBDL3P58872 BNIP3P33-201ENST00000598912 569 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 AL596327.1-201ENST00000603629 213 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 AL592436.1-201ENST00000605135 558 ntBASIC4.83□□□□□ -1.64
RHBDL3P58872 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDL3P58872 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RHBDL3P58872 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDL3P58872 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDL3P58872 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.82□□□□□ -1.64
RHBDL3P58872 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.82□□□□□ -1.64
RHBDL3P58872 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RHBDL3P58872 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RHBDL3P58872 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.82□□□□□ -1.64
RHBDL3P58872 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RHBDL3P58872 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RHBDL3P58872 SNORD113-6-201ENST00000363345 75 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 SNORD6-201ENST00000365444 73 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 SNORD3H-201ENST00000384486 214 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 MIR554-201ENST00000384874 96 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 TAS2R15P-201ENST00000390674 928 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 CYCSP45-201ENST00000402289 315 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC083875.1-201ENST00000419509 405 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.82□□□□□ -1.64
RHBDL3P58872 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC010099.3-201ENST00000423896 409 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 AC007742.1-201ENST00000425789 329 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.82□□□□□ -1.64
RHBDL3P58872 ELOCP26-201ENST00000436067 329 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.82□□□□□ -1.64
RHBDL3P58872 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.82□□□□□ -1.64
RHBDL3P58872 RPL7P52-201ENST00000449200 742 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 RPL23AP35-201ENST00000451906 501 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 RAD23BP3-201ENST00000454157 1152 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.82□□□□□ -1.64
RHBDL3P58872 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC092451.1-201ENST00000480211 153 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 AP002812.1-201ENST00000495378 474 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.82□□□□□ -1.64
RHBDL3P58872 RNU6-1095P-201ENST00000516148 108 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 RNU6-352P-201ENST00000516908 107 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 AP003461.1-201ENST00000528866 78 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.82□□□□□ -1.64
RHBDL3P58872 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.82□□□□□ -1.64
RHBDL3P58872 AC002400.1-201ENST00000569310 726 ntBASIC4.82□□□□□ -1.64
RHBDL3P58872 AC025627.2-201ENST00000576220 160 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms