Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.09□□□□□ -1.91
VSX2P58304 AL513175.1-201ENST00000431492 780 ntBASIC3.09□□□□□ -1.91
VSX2P58304 MTCO1P43-201ENST00000431831 488 ntBASIC3.09□□□□□ -1.91
VSX2P58304 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.09□□□□□ -1.91
VSX2P58304 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.09□□□□□ -1.91
VSX2P58304 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VSX2P58304 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.09□□□□□ -1.91
VSX2P58304 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VSX2P58304 RN7SL504P-201ENST00000494496 287 ntBASIC3.09□□□□□ -1.91
VSX2P58304 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VSX2P58304 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.09□□□□□ -1.91
VSX2P58304 HMGB3P15-201ENST00000507326 574 ntBASIC3.09□□□□□ -1.91
VSX2P58304 TMEM248P1-201ENST00000510579 951 ntBASIC3.09□□□□□ -1.91
VSX2P58304 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.09□□□□□ -1.91
VSX2P58304 FABP5P12-201ENST00000515543 389 ntBASIC3.09□□□□□ -1.91
VSX2P58304 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.09□□□□□ -1.91
VSX2P58304 AF279873.1-201ENST00000523393 313 ntBASIC3.09□□□□□ -1.91
VSX2P58304 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VSX2P58304 AP000916.1-201ENST00000533869 835 ntBASIC3.09□□□□□ -1.91
VSX2P58304 OR8L1P-201ENST00000534005 955 ntBASIC3.09□□□□□ -1.91
VSX2P58304 AC004217.3-201ENST00000551552 878 ntBASIC3.09□□□□□ -1.91
VSX2P58304 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.09□□□□□ -1.91
VSX2P58304 AC010735.1-201ENST00000567305 1026 ntBASIC3.09□□□□□ -1.91
VSX2P58304 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.09□□□□□ -1.91
VSX2P58304 AL671309.1-201ENST00000603750 544 ntBASIC3.09□□□□□ -1.91
VSX2P58304 VN1R9P-201ENST00000614184 867 ntBASIC3.09□□□□□ -1.91
VSX2P58304 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VSX2P58304 SEC63P2-201ENST00000503863 1939 ntBASIC3.09□□□□□ -1.92
VSX2P58304 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.09□□□□□ -1.92
VSX2P58304 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VSX2P58304 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VSX2P58304 MTND5P27-201ENST00000428871 1720 ntBASIC3.08□□□□□ -1.92
VSX2P58304 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VSX2P58304 RNU6-1243P-201ENST00000364028 107 ntBASIC3.08□□□□□ -1.92
VSX2P58304 SNORA11C-201ENST00000408532 129 ntBASIC3.08□□□□□ -1.92
VSX2P58304 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.08□□□□□ -1.92
VSX2P58304 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.08□□□□□ -1.92
VSX2P58304 UBE2V1P1-201ENST00000430836 445 ntBASIC3.08□□□□□ -1.92
VSX2P58304 CKS1BP5-201ENST00000434172 273 ntBASIC3.08□□□□□ -1.92
VSX2P58304 FTH1P1-201ENST00000437933 532 ntBASIC3.08□□□□□ -1.92
VSX2P58304 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.08□□□□□ -1.92
VSX2P58304 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.08□□□□□ -1.92
VSX2P58304 AC005002.1-201ENST00000447458 540 ntBASIC3.08□□□□□ -1.92
VSX2P58304 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.08□□□□□ -1.92
VSX2P58304 NPM1P49-201ENST00000448027 714 ntBASIC3.08□□□□□ -1.92
VSX2P58304 AL353718.1-201ENST00000451028 517 ntBASIC3.08□□□□□ -1.92
VSX2P58304 AC017015.1-201ENST00000477387 286 ntBASIC3.08□□□□□ -1.92
VSX2P58304 RNU6-202P-201ENST00000515998 96 ntBASIC3.08□□□□□ -1.92
VSX2P58304 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.08□□□□□ -1.92
VSX2P58304 AC068657.1-201ENST00000520807 306 ntBASIC3.08□□□□□ -1.92
VSX2P58304 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.08□□□□□ -1.92
VSX2P58304 OSBPL9P3-201ENST00000534523 595 ntBASIC3.08□□□□□ -1.92
VSX2P58304 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.08□□□□□ -1.92
VSX2P58304 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.08□□□□□ -1.92
VSX2P58304 AC004024.1-201ENST00000549244 247 ntBASIC3.08□□□□□ -1.92
VSX2P58304 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.08□□□□□ -1.92
VSX2P58304 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.08□□□□□ -1.92
VSX2P58304 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.08□□□□□ -1.92
VSX2P58304 ATP5F1P7-201ENST00000567330 760 ntBASIC3.08□□□□□ -1.92
VSX2P58304 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.08□□□□□ -1.92
VSX2P58304 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.08□□□□□ -1.92
VSX2P58304 AC091488.1-201ENST00000604239 660 ntBASIC3.08□□□□□ -1.92
VSX2P58304 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
VSX2P58304 SRP72P2-201ENST00000344851 1979 ntBASIC3.08□□□□□ -1.92
VSX2P58304 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VSX2P58304 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VSX2P58304 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VSX2P58304 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
VSX2P58304 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
VSX2P58304 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.07□□□□□ -1.92
VSX2P58304 DSTNP4-201ENST00000399472 474 ntBASIC3.07□□□□□ -1.92
VSX2P58304 PTGES3P2-201ENST00000407942 482 ntBASIC3.07□□□□□ -1.92
VSX2P58304 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.07□□□□□ -1.92
VSX2P58304 RNA5SP229-201ENST00000410809 99 ntBASIC3.07□□□□□ -1.92
VSX2P58304 USP9YP19-201ENST00000412165 485 ntBASIC3.07□□□□□ -1.92
VSX2P58304 BX890604.2-201ENST00000427883 474 ntBASIC3.07□□□□□ -1.92
VSX2P58304 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.07□□□□□ -1.92
VSX2P58304 RPL23AP22-201ENST00000437556 453 ntBASIC3.07□□□□□ -1.92
VSX2P58304 HMGB3P11-201ENST00000440127 604 ntBASIC3.07□□□□□ -1.92
VSX2P58304 CYCSP32-201ENST00000440548 321 ntBASIC3.07□□□□□ -1.92
VSX2P58304 Z77249.1-201ENST00000444622 1175 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC233982.1-201ENST00000451247 436 ntBASIC3.07□□□□□ -1.92
VSX2P58304 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.07□□□□□ -1.92
VSX2P58304 RN7SL863P-201ENST00000462370 296 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC109925.1-201ENST00000478069 331 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC021205.2-201ENST00000480069 347 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.07□□□□□ -1.92
VSX2P58304 OR5H3P-201ENST00000502817 919 ntBASIC3.07□□□□□ -1.92
VSX2P58304 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.07□□□□□ -1.92
VSX2P58304 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.07□□□□□ -1.92
VSX2P58304 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.07□□□□□ -1.92
VSX2P58304 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VSX2P58304 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.07□□□□□ -1.92
VSX2P58304 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.07□□□□□ -1.92
VSX2P58304 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.07□□□□□ -1.92
VSX2P58304 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.07□□□□□ -1.92
VSX2P58304 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.07□□□□□ -1.92
VSX2P58304 AC090312.2-201ENST00000582687 378 ntBASIC3.07□□□□□ -1.92
VSX2P58304 RN7SL622P-201ENST00000585292 275 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms