Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC4P56524 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC4P56524 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC4P56524 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC4P56524 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 OR11H4-201ENST00000315409 1082 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 RNU6-657P-201ENST00000383904 107 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 MIR134-201ENST00000385258 73 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 AC025750.1-201ENST00000399891 379 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 AL354941.1-201ENST00000438600 464 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 MTCO3P2-201ENST00000457365 171 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 RNF138P1-201ENST00000502765 546 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC4P56524 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC4P56524 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 MTCO1P47-201ENST00000523889 1271 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 MED28P5-201ENST00000528254 438 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC012417.1-201ENST00000582307 1039 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 AC107982.3-201ENST00000584957 985 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC4P56524 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC4P56524 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC4P56524 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC4P56524 VIS1.1-201ENST00000610517 203 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC4P56524 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HDAC4P56524 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC4P56524 ZNF962P-201ENST00000443465 3140 ntBASIC4.25□□□□□ -1.73
HDAC4P56524 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC4P56524 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC4P56524 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.24□□□□□ -1.73
HDAC4P56524 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.24□□□□□ -1.73
HDAC4P56524 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.24□□□□□ -1.73
HDAC4P56524 MTCO1P24-201ENST00000515438 1558 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.24□□□□□ -1.73
HDAC4P56524 MTND5P3-201ENST00000438536 1800 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HDAC4P56524 SNORD116-1-201ENST00000384335 95 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 RNU6-1122P-201ENST00000384449 107 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 RPL17P50-201ENST00000396131 546 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AL355379.1-201ENST00000405542 640 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AL023807.1-201ENST00000407932 359 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 PIGPP2-201ENST00000411569 458 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 TPT1P2-201ENST00000413105 503 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.24□□□□□ -1.73
HDAC4P56524 AL159169.1-201ENST00000421119 127 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AL389915.1-201ENST00000422463 466 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC092832.1-201ENST00000422934 400 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC006946.1-201ENST00000429106 328 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.24□□□□□ -1.73
HDAC4P56524 RPS25P9-201ENST00000435591 252 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 MTND4P32-201ENST00000437189 1237 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 MTND2P20-201ENST00000440805 661 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 RPL23AP16-201ENST00000441715 421 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 RPS4XP4-201ENST00000443195 763 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AL590399.6-201ENST00000446396 307 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 RSL24D1P3-201ENST00000449255 495 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 SLC31A1P1-201ENST00000451221 567 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.24□□□□□ -1.73
HDAC4P56524 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 RPL29P14-201ENST00000495837 428 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 AC112198.1-201ENST00000505369 1220 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.24□□□□□ -1.73
HDAC4P56524 HMGB1P28-201ENST00000507778 552 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 SNORA31.9-201ENST00000516429 84 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 RNA5SP309-201ENST00000516670 106 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 IGKV2-38-201ENST00000517443 247 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms