Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH13P55290 AL139089.1-201ENST00000620372 975 ntBASIC3.8□□□□□ -1.8
CDH13P55290 AC231657.1-201ENST00000624313 397 ntBASIC3.8□□□□□ -1.8
CDH13P55290 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH13P55290 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH13P55290 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH13P55290 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH13P55290 AC097714.1-201ENST00000511272 1647 ntBASIC3.8□□□□□ -1.8
CDH13P55290 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH13P55290 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH13P55290 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH13P55290 AP002001.2-201ENST00000529025 1469 ntBASIC3.79□□□□□ -1.8
CDH13P55290 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH13P55290 DDX43P2-201ENST00000604753 1354 ntBASIC3.79□□□□□ -1.8
CDH13P55290 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH13P55290 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH13P55290 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CDH13P55290 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH13P55290 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH13P55290 XIAPP3-201ENST00000312918 795 ntBASIC3.79□□□□□ -1.8
CDH13P55290 MIR423-201ENST00000362201 94 ntBASIC3.79□□□□□ -1.8
CDH13P55290 RNU6-1214P-201ENST00000363650 109 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AC016397.1-201ENST00000412463 242 ntBASIC3.79□□□□□ -1.8
CDH13P55290 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.79□□□□□ -1.8
CDH13P55290 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 AL807761.1-201ENST00000417622 171 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AIMP1P1-201ENST00000418670 937 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH13P55290 GLRXP1-201ENST00000423261 334 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AC010099.3-201ENST00000423896 409 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH13P55290 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH13P55290 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 AC010625.1-201ENST00000511296 403 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH13P55290 AL139174.1-201ENST00000531489 886 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AC023538.1-201ENST00000534576 736 ntBASIC3.79□□□□□ -1.8
CDH13P55290 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH13P55290 EEF1B2P4-201ENST00000551398 348 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH13P55290 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 MAGOH2P-202ENST00000584384 429 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AC010928.3-201ENST00000587712 541 ntBASIC3.79□□□□□ -1.8
CDH13P55290 VN1R79P-201ENST00000593540 513 ntBASIC3.79□□□□□ -1.8
CDH13P55290 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH13P55290 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH13P55290 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH13P55290 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH13P55290 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH13P55290 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH13P55290 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH13P55290 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH13P55290 AL356473.1-201ENST00000406203 1408 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH13P55290 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH13P55290 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH13P55290 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH13P55290 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH13P55290 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH13P55290 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH13P55290 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH13P55290 RNU6-263P-201ENST00000363811 107 ntBASIC3.78□□□□□ -1.8
CDH13P55290 RNU6-931P-201ENST00000363850 107 ntBASIC3.78□□□□□ -1.8
CDH13P55290 RNU6-335P-201ENST00000364563 113 ntBASIC3.78□□□□□ -1.8
CDH13P55290 TAS2R15P-201ENST00000390674 928 ntBASIC3.78□□□□□ -1.8
CDH13P55290 ATP5F1P4-201ENST00000397288 746 ntBASIC3.78□□□□□ -1.8
CDH13P55290 HLFP1-201ENST00000402375 499 ntBASIC3.78□□□□□ -1.8
CDH13P55290 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH13P55290 AL583834.1-201ENST00000406943 343 ntBASIC3.78□□□□□ -1.8
CDH13P55290 RHEBP3-201ENST00000411920 351 ntBASIC3.78□□□□□ -1.8
CDH13P55290 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH13P55290 AL953862.1-201ENST00000423016 168 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AL691449.1-201ENST00000426570 421 ntBASIC3.78□□□□□ -1.8
CDH13P55290 EZH2P1-201ENST00000431167 291 ntBASIC3.78□□□□□ -1.8
CDH13P55290 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH13P55290 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH13P55290 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH13P55290 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH13P55290 AC087312.1-201ENST00000471411 480 ntBASIC3.78□□□□□ -1.8
CDH13P55290 PPIAP15-201ENST00000479662 484 ntBASIC3.78□□□□□ -1.8
CDH13P55290 TRBV12-2-201ENST00000489763 344 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AC078918.1-201ENST00000498515 228 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH13P55290 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH13P55290 AC023141.12-201ENST00000512399 199 ntBASIC3.78□□□□□ -1.8
CDH13P55290 SNORA3.4-201ENST00000515969 96 ntBASIC3.78□□□□□ -1.8
CDH13P55290 IGKV2D-23-201ENST00000518179 286 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH13P55290 MRPL49P2-201ENST00000521066 465 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH13P55290 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH13P55290 CYCSP2-201ENST00000558168 301 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH13P55290 AC006270.2-201ENST00000578523 652 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms